Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02685 ATGGCGGCTGTCACGGAATTTGGGGTGTCTCAATTGCTGCAGGGTACTTCAAGGCAGACATTGTTCTTGAAGAAGAAGCCTCAGAAACATAGAAGTCACATGCTTTGGGGTACGCTTTGGAATAGGAATTGGGCTCTGGGATCAACTCGAAGAGCTTTGTCTTTAAAGTGTCACGCTCATGAAAATCCCGGAGCAGTTGTAGAAGAGCAACCTGGCTTGGTTGAGAAGCCTGCCTCGGAGGTTGTTCATTTATTCCGGGTACCGTTTATACAAAAAAGTGCAGCTGCTGAGCTTTTAAAGGATGCTCAGGTGCAAATCTGTAGTCAGATCGTGGAAATACAAACGGAGCAATGTTATAATATTGGCCTTAGCTCACAACTTTCGAGTGAAAAAATTTCTATCCTTAAATGGCTTCTTCAAGAAACATTTGAGCCCGAGAATCTGGGAAATGAGAGCTTTCTTGAGAAGAAGAGGAAGGAGGGATTGACTCCAGTTATAGTCGAGGTTGGTCCCAGGTTGTCATTTACCACAGCGTGGTCTACTAATGCTGTGGCAATTTGCCATGCTTGTGGATTGACGGAAGTGACCCGTTTGGAACGGTCAAGGAGGTACTTGTTGTTTACCACAAGTGCACTGCAAGATAATCAAATAAATGAATTTGCGTTTATGGTGCATGATAGAATGACTGAATGTGTTTATAGTCAGAAGTTAACATCCTTTGAGACTAGTATTGTTCCCGAGGAGATTCGTTATATAGCTGTTATGGAGAGGGGACGGAAGGCGTTAGAAGAGATTAATTTAGAGATGGGTTTTGCCTTTGATGACCAGGATTTAGAATACTACACCAAACTTTTCAGAGAAGACATTAAGCGCAACCCAACAAATGTGGAGTTGTTTGATATTGCGCAATCCAACAGTGAGCATAGCAGACATTGGTTTTTTACTGGAAACATTTTCATTGATGGGCAGCTTATGAATAAGACTCTAATGCAAATTGTGAAAAGTACACTGCTGGCAAATCCAAATAACTCAGTTATTGGGTTTAAGGATAACTCAAGTGCAATAAGGGGTTTCCCTGTAAAGCAGCTCCGACCAGTTCAGCCTGGCTCCTCATGTCCATTAGAAATTGCAGTAAGTGAGTTAGATATATTATTTACAGCTGAAACACATAATTTTCCATGCGCAGTGGCACCTTATCCTGGTGCAGAGACGGGTGCAGGAGGTCGCATTAGGGATACACATGCTACTGGAAGGGGGTCCTTTGTCCAGGCAGCTACAGCTGGTTACTGTGTTGGGAATCTCAACACGTCAGGCTTTTATGCTCCATGGGAAGATCCCTCCTTTACTTATCCATCGAATTTGGCACCACCTTTACAGATTCTTATAGATGCTAGTAACGGCGCATCTGATTATGGGAACAAATTTGGAGAGCCATTGATCCAGGGTTTCTGTAGAACTTTTGGAATGAGACTTCCTAGCGGGGAGAGGCGAGAATGGTTGAAGCCAATCATGTTCAGTGCAGGCATTGGACAGATAGACCACCTTCATATAACAAAGGGAGAACCTGACATTGGGATGCTGGTTGTCAAGATTGGAGGCCCAGCTTATCGCATTGGTATGGGAGGTGGGGCAGCCTCAAGCATGGTCAGTGGGCAGAATGATGCAGAGCTTGATTTCAATGCCGTGCAACGTGGGGATGCTGAGATGGCTCAAAAACTATATCGTCTTGTTCGGGCCTGTATTGAGATGGGGGATAAAAACCCAATAATCAGCATTCATGATCAGGGTGCTGGTGGGAACTGCAATGTCGTGAAGGAAATTATATATCCAAAGGGTGCTGAGATAGATGTCCGAGCAATTGTTGTTGGTGATCATACAATGTCTGTTCTAGAAATTTGGGGGGCAGAGTATCAGGAGCAGGATGCAATCTTGGTGAAGCCTGAAAGTCGTGATCTCTTGGAATCAATCTGTAGCAGGGAAAAAGTTTCAATGGCTGTTATTGGAACTATTAGTGGTGATGGACGTGTTGTGTTAGTCGATAGCTTAGCAACCCAACAGCGTATTTCAAATGGACTTCCTCCACCTCCGCCTGCAGTTGATCTTGAATTGGAGAAAGTCCTTGGTAACATGCCTAAAAAGTCTTTTCACTTTAATCGGTTGGTCTATGAGCGGGAGCCACTTGATATTGCCCCTGGGATTACAGTGATAGATTCTTTGAAGAGAGTGTTGAGTTTACCATCTGTCTGTTCAAAACGTTTCTTAACAACAAAAGTTGATAGATGTGTTACTGGTCTAGTTGCTCAGCAGCAAACTGTTGGTCCTTTGCAGATTCCCCTTGCCGATGTTGCTGTTACAGCTCAAACTTTTACTGATTTGACTGGAGGTGCTTGTGCCATTGGGGAACAGCCAATTAAAGGCTTGTTAGACCCCAAAGCAATGGCTCGGTTGGCTCTTGGCGAAGCACTAACAAATCTTGTATGGGCAAAGGTCACTTCCCTTTCTGATGTCAAGGCTAGTGGTAATTGGATGTATGCTGCCAAGCTTGATGGGGAAGGAGCTGACATGTATGATGCTGCCATATCTTTATCTGAAGCAATGATTGAACTTGGCATTGCTATTGATGGAGGGAAAGACAGCCTTTCTATGGCAGCCCATTCTGATGGAGAAGTTGTCAAGGCTCCTGGAAATCTTGTTATCAGTGTTTATGTTACTTGTGCTGATATAACAAAAACAGTGACTCCAGACTTAAAACTTAAGGATGAAGGTGTTTTGCTTCATATTGATTTGTCAAAAGGTAAGAGGCGGTTAGGTGGATCTGCTTTTGCCCAGGCATTTGACCAAGTTGGGGATGAGTGTCCTGATCTTGATGACGTTCCTTACCTTAAAAAGGTCTTTGAAGGTGTTCAAGATCTTCTTACTGATGAACTGATATCTGCTGGCCATGATATCAGCGATGGTGGGCTGCTTGTTTGTGCCTTAGAGATGGCATTTGCTGGTAATTGCGGACTTAATTTGGACATGGCATCTCAAGGTAACAGCCTCTTCCAAACACTCTATGCTGAAGAGCTTGGGTTAGTTCTTGAGGTAAGCAAGAAAAATCTGACTTTGGTAATGGACAAATTGATCAATGTGGGAGTTTCAGCTGAAATCATTGGTCAAGTAACTGCCAGTCCATCAATAGAAGTTAAGGTTGATGGGGAGATTTTCTTAACAGAAAAAACTAGCAGCCTAAGGGACATGTGGGAAGAGACCAGTTTTCAGCTGGAAAAGTTCCAAAGACTGGCATCTTGTGTGGACATGGAGAAAGAAGGACTAAAACATCGATGTGAACCCTCATGGGATCTGACCTATTTTCCTGTCTTCACTGAGGAAAAGTTTTTATCTGCAACTGTGAAACCTAAAGTGGCTGTGATCAGAGAAGAAGGGAGCAATGGAGATCGAGAAATGGCTGCAGCATTTTATGCTGCTGGTTTTGAGCCATGGGATGTTACTATGTCAGACCTTCTCAATCGAAAGATCTCTTTGCAAGAGTTTCGTGGAATTGTGTTTGTTGGTGGATTTAGCTATGCTGATGTGCTTGATTCTGCAAAAGGTTGGTCTGCTTGCATAAGATTCAATGAACATGTTTTGCAACAATTTCAGGATTTTTACAAGCGACCGGACACTTTTAGTCTAGGTGTATGCAACGGGTGTCAACTAATGGCTTTGTTGGGGTGGGTACCTGGTCCACGAATTGGGGGTGTGCATGGTGCTGGCAGTGACCTATCACAACCAAGGTTCATTCATAACGCGTCAGGGCGGTTTGAATGCCGCTTTACAAGTGTTACCATACTGCCCTCACCAGCTATGATGTTTAGGGGCATGGCAGGTAGCACAATGGGTATATGGGCTGCTCATGGTGAGGGAAGAGCTTACTTTCCAGACGAAGGTGTATTTGACCGAATTGTTCATTCTGAGTTAGCTCCTGTAAGATATTGTGATGACGCTGGGAATCCAACTGAGGCCTACCCTTTCAATCTGAATGGCTCTCCTTTAGGGGCTGCAGCTATTTGTTCCCCAGATGGGAGGCATCTTGCCATGATGCCTCATCCAGAGCGTTGCTTCTTAATGTGGCAGTTCCCATGGTACCCAAAGCACTGGCATGTAGAGAAGAATGGGCCTAGTCCTTGGTTGCGCATGTTCCAGAATGCGAGAGAGTGGTGTTCCTGA 4209 0.4431 MAAVTEFGVSQLLQGTSRQTLFLKKKPQKHRSHMLWGTLWNRNWALGSTRRALSLKCHAHENPGAVVEEQPGLVEKPASEVVHLFRVPFIQKSAAAELLKDAQVQICSQIVEIQTEQCYNIGLSSQLSSEKISILKWLLQETFEPENLGNESFLEKKRKEGLTPVIVEVGPRLSFTTAWSTNAVAICHACGLTEVTRLERSRRYLLFTTSALQDNQINEFAFMVHDRMTECVYSQKLTSFETSIVPEEIRYIAVMERGRKALEEINLEMGFAFDDQDLEYYTKLFREDIKRNPTNVELFDIAQSNSEHSRHWFFTGNIFIDGQLMNKTLMQIVKSTLLANPNNSVIGFKDNSSAIRGFPVKQLRPVQPGSSCPLEIAVSELDILFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVQAATAGYCVGNLNTSGFYAPWEDPSFTYPSNLAPPLQILIDASNGASDYGNKFGEPLIQGFCRTFGMRLPSGERREWLKPIMFSAGIGQIDHLHITKGEPDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDAELDFNAVQRGDAEMAQKLYRLVRACIEMGDKNPIISIHDQGAGGNCNVVKEIIYPKGAEIDVRAIVVGDHTMSVLEIWGAEYQEQDAILVKPESRDLLESICSREKVSMAVIGTISGDGRVVLVDSLATQQRISNGLPPPPPAVDLELEKVLGNMPKKSFHFNRLVYEREPLDIAPGITVIDSLKRVLSLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQIPLADVAVTAQTFTDLTGGACAIGEQPIKGLLDPKAMARLALGEALTNLVWAKVTSLSDVKASGNWMYAAKLDGEGADMYDAAISLSEAMIELGIAIDGGKDSLSMAAHSDGEVVKAPGNLVISVYVTCADITKTVTPDLKLKDEGVLLHIDLSKGKRRLGGSAFAQAFDQVGDECPDLDDVPYLKKVFEGVQDLLTDELISAGHDISDGGLLVCALEMAFAGNCGLNLDMASQGNSLFQTLYAEELGLVLEVSKKNLTLVMDKLINVGVSAEIIGQVTASPSIEVKVDGEIFLTEKTSSLRDMWEETSFQLEKFQRLASCVDMEKEGLKHRCEPSWDLTYFPVFTEEKFLSATVKPKVAVIREEGSNGDREMAAAFYAAGFEPWDVTMSDLLNRKISLQEFRGIVFVGGFSYADVLDSAKGWSACIRFNEHVLQQFQDFYKRPDTFSLGVCNGCQLMALLGWVPGPRIGGVHGAGSDLSQPRFIHNASGRFECRFTSVTILPSPAMMFRGMAGSTMGIWAAHGEGRAYFPDEGVFDRIVHSELAPVRYCDDAGNPTEAYPFNLNGSPLGAAAICSPDGRHLAMMPHPERCFLMWQFPWYPKHWHVEKNGPSPWLRMFQNAREWCS 1402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02685 1402 SUPERFAMILY PurM N-terminal domain-like 313 520 IPR036921 -
Phco2g02685 1402 Hamap Phosphoribosylformylglycinamidine synthase [purL]. 81 1402 IPR010073 GO:0004642|GO:0006189
Phco2g02685 1402 Pfam CobB/CobQ-like glutamine amidotransferase domain 1132 1401 - -
Phco2g02685 1402 FunFam Phosphoribosylformylglycinamidine synthase, putative 512 690 - -
Phco2g02685 1402 FunFam Phosphoribosylformylglycinamidine synthase, putative 721 905 - -
Phco2g02685 1402 Gene3D - 1077 1402 IPR029062 -
Phco2g02685 1402 Pfam Formylglycinamide ribonucleotide amidotransferase linker domain 262 311 IPR041609 -
Phco2g02685 1402 SUPERFAMILY Class I glutamine amidotransferase-like 1130 1401 IPR029062 -
Phco2g02685 1402 Gene3D - 306 511 IPR036921 -
Phco2g02685 1402 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 1134 1378 - -
Phco2g02685 1402 SUPERFAMILY PurM C-terminal domain-like 522 756 IPR036676 -
Phco2g02685 1402 CDD PurL_repeat1 297 680 - -
Phco2g02685 1402 Pfam AIR synthase related protein, C-terminal domain 525 678 IPR010918 -
Phco2g02685 1402 Pfam AIR synthase related protein, C-terminal domain 934 1064 IPR010918 -
Phco2g02685 1402 SMART GATase_5_2 1132 1401 - -
Phco2g02685 1402 Gene3D Phosphoribosylformylglycinamidine synthase, linker domain 245 305 - -
Phco2g02685 1402 Pfam Formylglycinamide ribonucleotide amidotransferase N-terminal 117 236 IPR040707 -
Phco2g02685 1402 SUPERFAMILY PurM N-terminal domain-like 732 913 IPR036921 -
Phco2g02685 1402 FunFam Probable phosphoribosylformylglycinamidine synthase 306 511 - -
Phco2g02685 1402 FunFam Putative phosphoribosylformylglycinamidine synthase 245 305 - -
Phco2g02685 1402 SUPERFAMILY FGAM synthase PurL, linker domain 245 312 - -
Phco2g02685 1402 CDD PurL_repeat2 781 1054 - -
Phco2g02685 1402 FunFam Probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial 911 1077 - -
Phco2g02685 1402 PANTHER PHOSPHORIBOSYLFORMYLGLYCINAMIDINE SYNTHASE 80 1402 - -
Phco2g02685 1402 NCBIfam phosphoribosylformylglycinamidine synthase 85 1400 IPR010073 GO:0004642|GO:0006189
Phco2g02685 1402 Gene3D - 723 908 IPR036921 -
Phco2g02685 1402 SUPERFAMILY PurM C-terminal domain-like 920 1112 IPR036676 -
Phco2g02685 1402 CDD GATase1_FGAR_AT 1135 1398 - -
Phco2g02685 1402 Gene3D - 909 1076 IPR036676 -
Phco2g02685 1402 Gene3D - 512 688 IPR036676 -
Phco2g02685 1402 FunFam Phosphoribosylformylglycinamidine synthase, putative 1077 1402 - -
Phco2g02685 1402 SUPERFAMILY PurS-like 84 240 IPR036604 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02685 2 56476352 56480996 Phco2g02685 2 56476352 56480996 ECH