Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02681 ATGAAACACAACACAGTCGAAGAAAGAAGGAGCAGAAACAGTTCCACTTTCCCAAACTTAATGCCTACTTCTTCACATTACTTCCTTCTCTTTTGCATTCTAGTCTCCATCTCCCGCACAGATGGGACACAACTCATAGTGGTAAACAACTGCAAAGAAAGTGTATGGCCTGCAATTCTCGGCAATGGAGGACAGCCTTCACCTAAACATGGCGGCTTTTATCTTGGAAGTGGCGAAGAGGTTGTTGTCGAAGTCCCTGAGGGTTGGTCAGGGAGAATCTGGGGCAGACAAGGGTGTTGCTTCGACCAACAAACAGGCAAAGGTTCTTGTCAAACAGGAGATTGTGGAGGCCTATTGCAATGCAATGGCATTGGTGGAGTCCCTCCTGCAACCCTAGTAGAAATGACCCTTGGAACTTCAAAATCAGCATTGCATTTCTATGATGTTAGTTTGGCTGATGGGTTTAACCTTCCTGTGTCAATGAAGCCACTGAGTGGTGGTGGTGCAGATTGTGGTGTTGCTAGCTGTGAAGCTGACTTGAATGTTTATTGCCCTGCAGCCTTGGTTGTGGAGAGGAATGGGAAGGTTGTGGGGTGCAAGAGTGCTTGTTTGGCAGCAAAGTCAGATAGGTATTGCTGCACTGGTGAGTTTGCTGAAAGATGCAAGCCAACTGTGTTTGCTCGTCTCTTCAAGACCGTTTGCCCTAATGCTTATAGCTATGCTTATGATGATTCAGCAGTGCTCAAGACTTGTGTGGCACCTCGCTATGTCATTACATTCTGCCCTCCACATTGA 795 0.4679 MKHNTVEERRSRNSSTFPNLMPTSSHYFLLFCILVSISRTDGTQLIVVNNCKESVWPAILGNGGQPSPKHGGFYLGSGEEVVVEVPEGWSGRIWGRQGCCFDQQTGKGSCQTGDCGGLLQCNGIGGVPPATLVEMTLGTSKSALHFYDVSLADGFNLPVSMKPLSGGGADCGVASCEADLNVYCPAALVVERNGKVVGCKSACLAAKSDRYCCTGEFAERCKPTVFARLFKTVCPNAYSYAYDDSAVLKTCVAPRYVITFCPPH 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02681 264 Pfam Thaumatin family 49 262 IPR001938 -
Phco2g02681 264 ProSitePatterns Thaumatin family signature. 106 121 IPR017949 -
Phco2g02681 264 FunFam Thaumatin-like protein 1a 43 262 - -
Phco2g02681 264 SUPERFAMILY Osmotin, thaumatin-like protein 44 263 IPR037176 -
Phco2g02681 264 CDD TLP-PA 44 261 - -
Phco2g02681 264 SMART tha2 45 262 IPR001938 -
Phco2g02681 264 PIRSF PR5 4 264 IPR001938 -
Phco2g02681 264 Gene3D Thaumatin 44 262 IPR037176 -
Phco2g02681 264 PRINTS Pathogenesis-related protein signature 145 161 IPR001938 -
Phco2g02681 264 PRINTS Pathogenesis-related protein signature 252 261 IPR001938 -
Phco2g02681 264 PRINTS Pathogenesis-related protein signature 44 56 IPR001938 -
Phco2g02681 264 PRINTS Pathogenesis-related protein signature 92 103 IPR001938 -
Phco2g02681 264 ProSiteProfiles Thaumatin family profile. 45 264 IPR001938 -
Phco2g02681 264 PANTHER OS03G0233200 PROTEIN 31 262 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02681 Phco-Chr2 56456793 56457797 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02681 2 56456793 56457797 Phco2g02681 2 56456793 56457797 ECH