Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02674 ATGAGTTTTGTTTTTCGAGGAACGAGAGCAGATATTGAAAATGGGTTTCCAGGATTTATACCGGAGAGGCGAGCATTGCGTGTTCATGCAGCACGTCCTAGTAATTCCAATTCACTCACTTTTCTCGTGACAGTTCTTCTGTTATTCATGATACTGAACTCTCACCAGATGTCCCCAAATTTTCTGCTCTGGCTGGTGCTTGGTGTTTTCTTGATGGCAACAATGTTGAGGATGTACGCAACATGCCAACAGCTTCAAGCACAGGGCCAAGCTCATGCAGCAGCAGCCAGTGGCATTCTTGGCCACACGGAACTGAGGTTGCATATGCCACCATCAATAGCACTTGCAAGTCGAGGGCGTCTGCAGGGTCTCAGACTTCAGCTTGCACTTCTTGACCGGGAGTTTGATGATCTTGATTATGAAACTTTGAGAGCTTTGGATTCAGATAATGTTTCTACTGCACCTTCCATGACCGAGGAAGAGATAAATGCTCTTCCAGTCCACAAATATAAGGTTGCCGGTCCCCAGAGTGGTGGTTCCTCAATGCAACAAGCATCATCTTCCACTTCTGTTGAGAAGAAGCAAGATAATTCAGGTGCTGTTGGGAGCATGAAAGCCTCTGACGATGAGCTCACTTGCAGTGTATGCTTGGAGCAAGTTAATGTTGGTGAAGTACTGCGTAGCTTACCTTGCTTGCATCAGTTTCACGCTAGTTGCATCGATCCATGGCTGCGCCAACAAGGTACATGCCCTGTATGTAAATTTCGAGCTGGATCTGGGTGGAGTGACAATGGACATAATGATATCGCAGACATGGTTTGA 822 0.4647 MSFVFRGTRADIENGFPGFIPERRALRVHAARPSNSNSLTFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATMLRMYATCQQLQAQGQAHAAAASGILGHTELRLHMPPSIALASRGRLQGLRLQLALLDREFDDLDYETLRALDSDNVSTAPSMTEEEINALPVHKYKVAGPQSGGSSMQQASSSTSVEKKQDNSGAVGSMKASDDELTCSVCLEQVNVGEVLRSLPCLHQFHASCIDPWLRQQGTCPVCKFRAGSGWSDNGHNDIADMV 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02674 273 SUPERFAMILY RING/U-box 208 257 - -
Phco2g02674 273 ProSiteProfiles Zinc finger RING-type profile. 213 254 IPR001841 -
Phco2g02674 273 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 186 259 IPR013083 -
Phco2g02674 273 SMART ring_2 213 253 IPR001841 -
Phco2g02674 273 MobiDBLite consensus disorder prediction 176 202 - -
Phco2g02674 273 Pfam Ring finger domain 212 254 IPR001841 -
Phco2g02674 273 CDD RING-H2_PA-TM-RING 212 254 - -
Phco2g02674 273 PANTHER TARGET OF ERK KINASE MPK-1 1 260 - -
Phco2g02674 273 MobiDBLite consensus disorder prediction 173 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02674 Phco-Chr2 56415258 56418280 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02674 2 56415258 56418280 Phco2g02674 2 56415258 56418280 ECH