Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02649 ATGGAAGAAAGCCCTCGAGCTCCAAGAAAGCGAAGCCACCCTTTTCCTTCTTCTCCCCCTTCTCCTCCACTTTCCAAGCGCCCCAATTTCCCCTCCTTCCAAGACATTCCCAACCTTCCTTCCAACGTCAAATCTCTCTGTCACCTCATCGCCACCACCTCCGCCGCTGCCATCGAGCACGCCCTCCAATGCGCCGCTGTCACCATTACCCCTCAAGACGTCGAGGAAGTCCTCAAACTCTCTTACGGCTTTCCAGGCCAGGCCGTCAAATTCTTCCGGTGGAGCGGCCGCCACCTCCGCGACAACCACACGCCTTATTCCTGGAACCTCGTGGTCGACATCTTGGGCAAGAATCGCTTCTTCGACGCGATGTGGGACGCTATTAAGTCAATGCAGAAAGAAGGGCTACTCTCACTGGCCACTTTCGCCTCTGTCTTCGGGAGCTATGTCATCGCCAACAGGACCCGGGAAGCGATTGTGGCGTTTGAGGTTATGGAGAATTACGGTTGTGTGAGGGACGTGATTGCTTTGAACTCATTGTTGAGTGCAATTTGTAGGGATGGTAGGACAGTTGATGCTTGTGATTACTTGCAGAGTGCTAAGAAATTTGTCCGGCCGGATGCCGATTCTTACGCGATTTTGATGGAAGGTTGGGAGAGAGAAGGAGACAAGGGTGTGGTTGGTGCGAAGGAGACTTTTGCTGAGATGGTGATTGAGATTGGATGGGATCCTGCCAATGTGCCTGCTTATGATTCATTCCTGTGTGCCCTTGTTAGAGGGCCTGATGGATTGCTTGAAGCTATTAAGTTTGTTGATTCAATGAGGGATAGGAGGTGTTACCCTGGTGTGAGGTTCTTGAAGGTTGCATTGGATGAGTGTGTCAAGTATCATGATGTTAGGACTGCTCAGTTTTTCTGGGAGGTGTTGGTGGGGGTGGGGAGGGTGTTGCAGCCCTCCACGGAGATGTACAATTTGATGATTGCTTTGCTTTGTTATTGTGGTGATACTGATGGTGCGAGGAGGATGCTTGATGAGATGGTTTACCGAGGGGCATTTCCTGATGTGGTGACTTATAATTTGCTGTTCAAGTTCTTGATCAAGGGGAGGAAGTTGAGGGAGGCGTCTGCAGTGTTTGCTGAGATGGTGAAGAACGAGTTTGTACCGGATCAGGATAACTGTGATGCGGCGGTTAAGGCATATGTGGATGGTGGGGAGCCTCTTTTGGCGATGAAGGTTTGGAAGTGTTTGGTTGAGAATTATCAGAATGATTTGGAACGGACAGCGAATTTTCTGGTTGTGGGGCTTCGTGATTTGAATAGGGTTCCGGAGGCGGTTAAGTATGCTGAGCATATGATTGGAAGAGGAATCAGGTTGTCCTCTTCAACCCTGTCAAAACTGAGACAAACCCTTGTCAAAGAAAGAAAGGAATTTCTGTATGAAGAACTTGTGAGAAAGTGCAAATCTCAACAAGTGGTTTGA 1479 0.4943 MEESPRAPRKRSHPFPSSPPSPPLSKRPNFPSFQDIPNLPSNVKSLCHLIATTSAAAIEHALQCAAVTITPQDVEEVLKLSYGFPGQAVKFFRWSGRHLRDNHTPYSWNLVVDILGKNRFFDAMWDAIKSMQKEGLLSLATFASVFGSYVIANRTREAIVAFEVMENYGCVRDVIALNSLLSAICRDGRTVDACDYLQSAKKFVRPDADSYAILMEGWEREGDKGVVGAKETFAEMVIEIGWDPANVPAYDSFLCALVRGPDGLLEAIKFVDSMRDRRCYPGVRFLKVALDECVKYHDVRTAQFFWEVLVGVGRVLQPSTEMYNLMIALLCYCGDTDGARRMLDEMVYRGAFPDVVTYNLLFKFLIKGRKLREASAVFAEMVKNEFVPDQDNCDAAVKAYVDGGEPLLAMKVWKCLVENYQNDLERTANFLVVGLRDLNRVPEAVKYAEHMIGRGIRLSSSTLSKLRQTLVKERKEFLYEELVRKCKSQQVV 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02649 492 MobiDBLite consensus disorder prediction 1 31 - -
Phco2g02649 492 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 319 353 IPR002885 -
Phco2g02649 492 Pfam PPR repeat 106 136 IPR002885 -
Phco2g02649 492 Gene3D Tetratricopeptide repeat domain 265 433 IPR011990 GO:0005515
Phco2g02649 492 Gene3D Tetratricopeptide repeat domain 81 227 IPR011990 GO:0005515
Phco2g02649 492 NCBIfam pentatricopeptide repeat 106 136 IPR002885 -
Phco2g02649 492 NCBIfam pentatricopeptide repeat 322 354 IPR002885 -
Phco2g02649 492 NCBIfam pentatricopeptide repeat 356 389 IPR002885 -
Phco2g02649 492 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 354 388 IPR002885 -
Phco2g02649 492 Pfam PPR repeat family 318 365 IPR002885 -
Phco2g02649 492 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED 18 475 - -
Phco2g02649 492 MobiDBLite consensus disorder prediction 12 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02649 Phco-Chr2 56176714 56178192 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02649 2 56176714 56178192 Phco2g02649 2 56176714 56178192 ECH