Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02587 ATGGATCGGGAAGGAGGATCCAACGGCGGATCTTGCTACTACTCCGTTCTCGAGATTCGCAGGGACGCCTCCTTCTCTGATGTTCGCACTGCCTACCGCAAACTCGCTATGAGGTGGCACCCGGACAAGTGGGCTCGGAATCCCGCAACCGCCGGAGAAGCCAAACGGCGGTTTCAGCAAATCCAAGAAGCTTACTCAGTTCTTTCCGACCAGTCTAAAAGATCAATGTACGATGCTGGGCTCTACGATCCTTTGGAGGAAGAAGACCAAGAGTTTTGTGATTTCATGCAAGAGATGATATCCATGATGAACAATGTGAAAGACGAGGGGGACAGTATGGAGGACCTACAGAGGATGTTCGTGGAGATGGTGGGGGGTGATGGGATCGGCATTGACTTGAGCCAGGATCAGATGGCTGGGAAGCGAGGACGTGTCAACGGATCAAGAGGCAATGCGGCCAAGCGCAGCAACTCTCGTTCTTAG 483 0.53 MDREGGSNGGSCYYSVLEIRRDASFSDVRTAYRKLAMRWHPDKWARNPATAGEAKRRFQQIQEAYSVLSDQSKRSMYDAGLYDPLEEEDQEFCDFMQEMISMMNNVKDEGDSMEDLQRMFVEMVGGDGIGIDLSQDQMAGKRGRVNGSRGNAAKRSNSRS 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02587 160 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Phco2g02587 160 Gene3D DnaJ domain 2 104 IPR036869 -
Phco2g02587 160 PANTHER PUTATIVE, EXPRESSED-RELATED 7 129 - -
Phco2g02587 160 SUPERFAMILY Chaperone J-domain 12 84 IPR036869 -
Phco2g02587 160 MobiDBLite consensus disorder prediction 132 160 - -
Phco2g02587 160 Pfam DnaJ domain 13 78 IPR001623 -
Phco2g02587 160 PRINTS DnaJ domain signature 32 47 IPR001623 -
Phco2g02587 160 PRINTS DnaJ domain signature 14 32 IPR001623 -
Phco2g02587 160 PRINTS DnaJ domain signature 53 73 IPR001623 -
Phco2g02587 160 SMART dnaj_3 11 73 IPR001623 -
Phco2g02587 160 CDD DnaJ 12 70 IPR001623 -
Phco2g02587 160 ProSiteProfiles dnaJ domain profile. 12 81 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02587 Phco-Chr2 55676659 55677524 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02587 2 55676659 55677524 Phco2g02587 2 55676659 55677524 ECH