Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02576 ATGACATGTTTACTGCGAAAATCTCTTAGGACTAAGGCCTTGTCCCCGTTTCTGCACAAACTCGTAGGAAACTCGTCCGAGTCTCATCACACTCTGGCCTCCTCATGCTGGTTTTGGTGTCACCAATCGTCACATTCCCTTCCACAAAAAACCAATCCTTGCTTCCCTTCATATTCGATCCCAAGTTCCTTCTCTCACGCGCTTCTCCAAATTCGCTTTTGGGCCTCTGAGGCGGCCGCCACCGAGCCCTCAACCTCTGATGGGCTCACGGTCCAAAAAATTCTGGCCAATAATTGGAACATACTGGACGAAAACGACGGCGATTGGAAGAGTCATGCCGCCGCTGTAGCTCAATCTATTTATTTGATCAAACGCCGCTTACAGTGGGAAAAATTGAAGGTGAGGTTGGATATGTTATCATTCCAGCTGGGTAAGGAAGACCTTTGGGATGATCCGGAGCGCGCAGGTAAAATAAGCCGAGAGCATGGTTCGCTCCTGGGGAAAATGAAAGAAGTAATTGCATTGGAACAAGAGTTACTTGAGCATATTGACATGATAAAGCTTGCCCGCGAAGAGAATGATGCGGATTTGGAATCGGAATCATTGAAACTGTTGCTTAACATGAGAAGAGATGCAAAAGAGAAAGAGCTAGAGGCGTTGCTTGCGGGGGAGCAAGATTCTTGTTCTTGCTACATTGAGGTTCAAGCTGGGGCTGGGGGTACGGAGAGCATGGACTGGGCATCAATGGTCATGCAAATGTATAAGTCATGGGCACAGCGGCGTAGATATAAAGTAACTTTAATGGATGAAATGCCTGGTGAGATTGCAGGAATCAAGCGAGCTACCATTAAAGTAGATGGTGAGTTTGCATTTGGATATGCCAAAGCAGAAATAGGAGTGCACAGGCTGGTGCGCATATCACCTTTTGACAGCAATAAGCGACGACATACTTCATTTGCTGCTGTGGCAGTGATTCCAATCCTAGGTGATGGATCTACCCATGTACAGATTAATGAATCTGATCTTAGAATTGAACGATTTCGGGCTGGTGGTGCTGGTGGCCAGCATGTTAACACAACTGAGAGTGCTGTAAGAATAGTTCATATTCCTACAGGAGTTACTGCAACTTGTCAGAATGAAAGATCGCAGCATCAGAATAAGGCTTCAGCTATGGCTGTGCTTCAGTCAAGGTTAGACCAACTGGAGATGGCACGCCAGGCTCAGTTGAATGCACAACATACACAGTCTCTCACGGACATAACATGGGGCAGTCAGATTCGTAGTTATGTTCTTCATCCTTACCGTATGGTGAAAGATCTTAGAACTAACTATGAGGTTTCAGATCCTGACTCCGTCCTTGAGGGAGATCTAGACGGATTCATCTTGAGCTATCTATCAGCTTCTTTGGATAAAGAGGATGATGCTTAA 1428 0.4601 MTCLLRKSLRTKALSPFLHKLVGNSSESHHTLASSCWFWCHQSSHSLPQKTNPCFPSYSIPSSFSHALLQIRFWASEAAATEPSTSDGLTVQKILANNWNILDENDGDWKSHAAAVAQSIYLIKRRLQWEKLKVRLDMLSFQLGKEDLWDDPERAGKISREHGSLLGKMKEVIALEQELLEHIDMIKLAREENDADLESESLKLLLNMRRDAKEKELEALLAGEQDSCSCYIEVQAGAGGTESMDWASMVMQMYKSWAQRRRYKVTLMDEMPGEIAGIKRATIKVDGEFAFGYAKAEIGVHRLVRISPFDSNKRRHTSFAAVAVIPILGDGSTHVQINESDLRIERFRAGGAGGQHVNTTESAVRIVHIPTGVTATCQNERSQHQNKASAMAVLQSRLDQLEMARQAQLNAQHTQSLTDITWGSQIRSYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLDKEDDA 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02576 475 PANTHER PEPTIDE CHAIN RELEASE FACTOR 2 107 466 - -
Phco2g02576 475 Pfam RF-1 domain 334 441 IPR000352 GO:0003747|GO:0006415
Phco2g02576 475 Gene3D Release factor 108 218 - -
Phco2g02576 475 Coils Coil 391 411 - -
Phco2g02576 475 Gene3D - 328 424 - -
Phco2g02576 475 ProSitePatterns Prokaryotic-type class I peptide chain release factors signature. 348 364 IPR000352 GO:0003747|GO:0006415
Phco2g02576 475 SUPERFAMILY Release factor 133 469 IPR045853 -
Phco2g02576 475 Pfam PCRF domain 134 322 IPR005139 GO:0006415
Phco2g02576 475 NCBIfam peptide chain release factor 2 116 465 IPR004374 GO:0005737|GO:0006415|GO:0016149
Phco2g02576 475 FunFam Peptide chain release factor 1 331 424 - -
Phco2g02576 475 Coils Coil 172 192 - -
Phco2g02576 475 SMART PCRF_a_2 187 297 IPR005139 GO:0006415
Phco2g02576 475 Gene3D - 232 461 - -
Phco2g02576 475 Hamap Peptide chain release factor 2 [prfB]. 105 469 IPR004374 GO:0005737|GO:0006415|GO:0016149
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02576 Phco-Chr2 55590985 55595617 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02576 2 55590985 55595617 Phco2g02576 2 55590985 55595617 ECH