Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02558 ATGGGTTGTGGCGGTGCATTCTCGCATCTCATTCTCACTGCTATCGCAATAGCAATAGCGATTCCATTGGGTGGCTGCGATACGCCTCCGGTGGTGTTTGTCTTCGGCGATTCCAACTCCGACACAGGTGGACTCGCTTCCGGACTCGGTTTCCCGATCAATCTTCCCAATGGCCGCACTTTCTTCCGTAGATCCACTGGTCGCTTGTCCGATGGACGCCTCGTCATCGACCTACTCTGCCAAAGTTTGAATGCAAGTTTGTTGGTACCATACTTGGACGCCTTGTCCGGAACCTCATTCACAAATGGAGCAAACTTTGCTGTGGTGGGGTCCTCTACTCTCCCTAAGTATGTTCCTTTCTCCTTAAATATACAGGTCATGCAATTCCGGCGTTTCAAAGCTCGTTCTCTTGATCTTGTTACGGCAGGTGCAAGAAATTTCATTAGTGACGAAGGCTTCCGCAATGCACTCTACTTGATTGATATTGGGCAAAACGACCTAGCTGATTCATTTGCCAAAAATCTGTCATACGCACAAGTCATTAAGAAGATCCCATCATTTATAACTGAGATTGAGAATGCTGTTAAGAATTTACATAATGAAGGGGCCAGGAAGTTTTGGGTTCACAATACTGGGCCATTGGGCTGTCTTCCTAAAATACTTGCACTGTCTCAGAAGAAGGATCTAGATTCATTGGGATGTCTTTCTAGCTATAACTCTGCAGCAAGGTTGTTTAATGAAGCGCTGCTTCATTTGAGTCAGAAACTAAGATCTGAACTGAAGGATTCTACTTTAGTCTATGTTGATATTTATGGCATTAAGCATGACCTCATTACAAATGCCGCAAAATATGGTTTCTCAAATCCGTTGATGGTATGTTGCGGCTTTGGAGGGCCTCCTTACAACTTTGACGTAAGGGTAACATGCGGACAACCTGGTTATCAGGTTTGTGGCGAAGGGGCTCGATATGTAAGCTGGGATGGAATTCATCATACTGAAGCTGCAAATACGTTGATAGCTTCTAAGATACTTTCCATGGATTATTCCACACCGCGGACACCTTTTCATTTCTTTTGCCGCTCCTGA 1086 0.4503 MGCGGAFSHLILTAIAIAIAIPLGGCDTPPVVFVFGDSNSDTGGLASGLGFPINLPNGRTFFRRSTGRLSDGRLVIDLLCQSLNASLLVPYLDALSGTSFTNGANFAVVGSSTLPKYVPFSLNIQVMQFRRFKARSLDLVTAGARNFISDEGFRNALYLIDIGQNDLADSFAKNLSYAQVIKKIPSFITEIENAVKNLHNEGARKFWVHNTGPLGCLPKILALSQKKDLDSLGCLSSYNSAARLFNEALLHLSQKLRSELKDSTLVYVDIYGIKHDLITNAAKYGFSNPLMVCCGFGGPPYNFDVRVTCGQPGYQVCGEGARYVSWDGIHHTEAANTLIASKILSMDYSTPRTPFHFFCRS 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02558 361 CDD SGNH_plant_lipase_like 30 345 IPR035669 -
Phco2g02558 361 FunFam GDSL esterase/lipase At1g09390 21 348 - -
Phco2g02558 361 Pfam GDSL-like Lipase/Acylhydrolase 32 343 IPR001087 GO:0016788
Phco2g02558 361 Gene3D SGNH hydrolase 28 347 IPR036514 -
Phco2g02558 361 SUPERFAMILY SGNH hydrolase 32 344 - -
Phco2g02558 361 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 14 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02558 Phco-Chr2 55428918 55432703 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02558 2 55428918 55432703 Phco2g02558 2 55428918 55432703 ECH