Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02556 ATGTCAGCGTCTTTCTCGTCAACCTCGCTTCCGTTCTCCGAATCTTCATTCGCATTCCAAAGACCACCGCTTCTTTGCTCTAAAGTTGCATCAAATAACTTTCACTCAGTAGCCTGTGGTGGTCGTCTTGCACTGAATGTTGGAGGCACAAGCTTGTGTCGAAGGTTTCGTGGCTTCAAACTGTGGGTACTTGAGAGACTCAACTTTCAATTTCAGTCACCAAAGCAACCTAAGAATAGAATTCGCTTCGAAAATAATTTGGAAAATTCCGGTTCATCAAATGAAAAGGGACCACTTTCTGATTCATCCTCGATTCTCCGTGTTCCTGATGATAAGGTCACTTCCATGGAGTCTCCATCTTTGCAGCAGACAGGTTTGTCTGCTACTCCCATGGATGTTAGCAGAAAACCCTCACTTTGCATTTCTGTCATAGGAGCTACCGGTGAGCTGGCAAAGAGTAAGATTTTCCCTGCTTTATTTGCCCTCTACTACAGTGGCTTTCTTCCTGAGAATGTAGGCATTTTTGGGTATTCAAGGAAGGATATAACGGATGAAGACCTGCGATCTATTATAGCTTCAACATTAACATGCCGAGTTGATCATCAAGAGAATTGTGTGGACAAATTAGATGCTTTCCTTAGTAGAACATATCATATTAATGGAGGCTGTGACAATAAATATGGGATGTCCATGCTGAATTCCCGAATGGAACAAATGGAGGGAGGATCCAAAACCAACAGGATATTCTACCTTTCTGTGCCACAAGAAGCAGTTTTAGATGTTACGGCTAGTCTTTCTAGCAGTGCTCAGACTCAAAACGGATGGAATCGCATAATATTTGAGAAGCCATTTGGCTTTGATGCACTTTCTTCCTTTAGGATGACACAATATCTACTTTCAAACTTTGAGGAAAAGCAAATATATAGGATTGATCATCTTCTAGGAAGGAATCTCATTGAAAATCTCACAGTTTTAAGGTTTTCAAATCTAGTTTTTGAGCCACTTTGGAGTCGTACTTACATAGACAATGTACAGGTCATTTTATCAGAAGACCTGACCAAGCATCCAGGAAGATATTTCAGTGGCTATGGGATTATCCGTGATATTGTTCATAGTCACATTCTCCAAACAATTGCATTGCTTGCCATGGAACCACCAGTAAGCCTTGACGGAGAAGATATTCGAAATGAAAAGGTCAAGGTTTTGAGGTCAATTCGCAAATTGGAGCCTAAGGATGTCATTCTTGGGCAATATAAAGCGAGTGGTGGAGCCAAAGTTGATACATGCTTAAATGGTCTGACACCTACTTATTTTGCTGCTGCACTATACATTGACAATGCACGATGGGATGGTGTGCCATTTTTTATTAAAACAGGCTTGGGACTCATCAAACACCAAATGGAGATACGGATTCAATTTCGAAATGTTCCGGGTAATGTGTACCGTGAGTGCATGGGGCATAACATGGACCGTGCTGTAAATGAGCTCATTCTACGTGATGTTCCGGATGAAGCTATTTTGGTGAGAGTTAACAACAAGGTTCCAGGACTAGGCTTGCAACTGGACTCTTCAGAACTAAATTTGCTTTACAAGGACAAGTACAACATGGAGGTTCCAGATTCGTATGAGCAACTTCTTCTTGATGTCATTGATGGGGACAACCATTTGTTTATGAGAAGTGATGAACTTGAAGCTGCATGGAACATTCTAACTCCAATTCTGAATGAGATAGACAAAGACAATATATCAGTGGAGCTTTATGAGATGGGGGGTCGAGGTCCTGTGGGGGCATACTACCTTTGGGCAAAACATGGTGTCCGTTGGGTAGAGGATTAA 1836 0.4167 MSASFSSTSLPFSESSFAFQRPPLLCSKVASNNFHSVACGGRLALNVGGTSLCRRFRGFKLWVLERLNFQFQSPKQPKNRIRFENNLENSGSSNEKGPLSDSSSILRVPDDKVTSMESPSLQQTGLSATPMDVSRKPSLCISVIGATGELAKSKIFPALFALYYSGFLPENVGIFGYSRKDITDEDLRSIIASTLTCRVDHQENCVDKLDAFLSRTYHINGGCDNKYGMSMLNSRMEQMEGGSKTNRIFYLSVPQEAVLDVTASLSSSAQTQNGWNRIIFEKPFGFDALSSFRMTQYLLSNFEEKQIYRIDHLLGRNLIENLTVLRFSNLVFEPLWSRTYIDNVQVILSEDLTKHPGRYFSGYGIIRDIVHSHILQTIALLAMEPPVSLDGEDIRNEKVKVLRSIRKLEPKDVILGQYKASGGAKVDTCLNGLTPTYFAAALYIDNARWDGVPFFIKTGLGLIKHQMEIRIQFRNVPGNVYRECMGHNMDRAVNELILRDVPDEAILVRVNNKVPGLGLQLDSSELNLLYKDKYNMEVPDSYEQLLLDVIDGDNHLFMRSDELEAAWNILTPILNEIDKDNISVELYEMGGRGPVGAYYLWAKHGVRWVED 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02556 611 Hamap Glucose-6-phosphate 1-dehydrogenase [zwf]. 138 610 IPR001282 GO:0006006|GO:0016614|GO:0050661
Phco2g02556 611 PANTHER GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE G6PD 118 608 IPR001282 GO:0006006|GO:0016614|GO:0050661
Phco2g02556 611 Gene3D - 135 309 - -
Phco2g02556 611 PRINTS Glucose-6-phosphate dehydrogenase signature 370 386 IPR001282 GO:0006006|GO:0016614|GO:0050661
Phco2g02556 611 PRINTS Glucose-6-phosphate dehydrogenase signature 301 329 IPR001282 GO:0006006|GO:0016614|GO:0050661
Phco2g02556 611 PRINTS Glucose-6-phosphate dehydrogenase signature 448 474 IPR001282 GO:0006006|GO:0016614|GO:0050661
Phco2g02556 611 PRINTS Glucose-6-phosphate dehydrogenase signature 277 290 IPR001282 GO:0006006|GO:0016614|GO:0050661
Phco2g02556 611 PRINTS Glucose-6-phosphate dehydrogenase signature 352 369 IPR001282 GO:0006006|GO:0016614|GO:0050661
Phco2g02556 611 Gene3D Dihydrodipicolinate Reductase; domain 2 310 610 - -
Phco2g02556 611 NCBIfam glucose-6-phosphate dehydrogenase 139 609 IPR001282 GO:0006006|GO:0016614|GO:0050661
Phco2g02556 611 Pfam Glucose-6-phosphate dehydrogenase, C-terminal domain 324 608 IPR022675 GO:0004345|GO:0006006|GO:0050661
Phco2g02556 611 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 311 609 - -
Phco2g02556 611 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 133 324 IPR036291 -
Phco2g02556 611 FunFam Glucose-6-phosphate 1-dehydrogenase 310 609 - -
Phco2g02556 611 Pfam Glucose-6-phosphate dehydrogenase, NAD binding domain 143 321 IPR022674 GO:0006006|GO:0016614|GO:0050661
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02556 Phco-Chr2 55414727 55420672 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02556 2 55414727 55420672 Phco2g02556 2 55414727 55420672 ECH