Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02552 ATGGCGAGGAAGAAGATCAGAGAGTACCACTCCAAGAGGCTTCTCAAGGAACACCTCAAACGGCTTGCCTCTATCGACCTCGACATCCTTTCTGCTCAGGTTACAAACTCAACGGACTTCGCTGAATTTACAGACCACCATCCCTGGTTGTCGTCGACAAAGGTGGTTGTCAAACCGGACATGCTCTTCGGCAAGCGCGGAAAGAGTGGCTTAGTAGCTCTCAATTTGGACATAGCTGAAGTCGCTGAGTTTGTTAAAGCACGCCTCGGCGTTGAGGTTGAGATGGGAGGTTGCAAGGCGCCTATAACTACTTTCATTGTTGAACCGTTTGTTCCTCACGACCAAGAGTATTATTTGTCCATTGTTTCTGAAAGGCTTGGCTCCACCATCAGCTTTTCTGAATGCGGGGGCATTGATATTGAAGAGAATTGGGATAAGGTTAAAACTATATTCCTTCCAACGGAAAACCAGTTGACTCCGAAGGCATGTGCACCGTTGATTGCTACACTTCCTTTGGAGATTCGGGGGACAATAGGTGATTTCATACTGGGTGTGTTTGCTGTCTTCCAAGATCTGGACTTCAGTTTCCTTGAGATGAATCCATTTACAATGGTGAATGAAAAGCCATATCCGCTGGATATGAGAGGGGAATTGGATGACACTGCTGCATTCAAGAACTTCAACAAGTGGGGCAATATAGAATTTCCATTGCCTTTTGGAAGAGTTCTGAGCCCTACAGAAAGCTTCATCCATTCATTGGATGATAAGACAAGTGCGTCGTTGAAATTTACTGTATTGAACCCAAAAGGACGCATCTGGACAATGGTAGCTGGAGGTGGTGCAAGCGTAATTTATGCTGATACTGTTGGAGATTTAGGCTATGCATCAGAGCTTGGTAACTATGCTGAGTACAGTGGAGCACCAAATGAGGAAGAAGTGTTGCAGTATGCAAGAGTCGTAATTGATTGTGCTACTGCAGACCCTGATGGCCGTAAGAGAGCCCTTCTTATTGGAGGTGGCATAGCAAATTTCACTGACGTTGCTGCCACATTCAGCGGGATTATTCGAGCGCTGAAAGAGAAGGAATCAAAGCTTAAAGCAGCGCGAGTCCACATCTATGTCAGAAGAGGTGGTCCAAACTATCAGACTGGTTTAGCGAAGATGCGTGCATTGGGGGAGGAATTGGGAGTACCAATTCAGGTTTATGGACCGGAGGCCACAATGACGGGTATCTGCAAACAAGCTATTGATTGCATCATGTCCGAAGCTTAA 1272 0.4607 MARKKIREYHSKRLLKEHLKRLASIDLDILSAQVTNSTDFAEFTDHHPWLSSTKVVVKPDMLFGKRGKSGLVALNLDIAEVAEFVKARLGVEVEMGGCKAPITTFIVEPFVPHDQEYYLSIVSERLGSTISFSECGGIDIEENWDKVKTIFLPTENQLTPKACAPLIATLPLEIRGTIGDFILGVFAVFQDLDFSFLEMNPFTMVNEKPYPLDMRGELDDTAAFKNFNKWGNIEFPLPFGRVLSPTESFIHSLDDKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVAATFSGIIRALKEKESKLKAARVHIYVRRGGPNYQTGLAKMRALGEELGVPIQVYGPEATMTGICKQAIDCIMSEA 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02552 423 Gene3D - 1 233 - -
Phco2g02552 423 FunFam ATP-citrate synthase alpha chain protein 1 233 - -
Phco2g02552 423 FunFam ATP-citrate synthase alpha chain protein 240 422 - -
Phco2g02552 423 SUPERFAMILY Succinyl-CoA synthetase domains 259 403 IPR016102 -
Phco2g02552 423 PANTHER SUCCINYL-COA SYNTHETASE BETA CHAIN 5 388 IPR005809 GO:0006099
Phco2g02552 423 Pfam ATP-grasp domain 6 203 IPR013650 -
Phco2g02552 423 Pfam ATP citrate lyase citrate-binding 241 417 IPR032263 -
Phco2g02552 423 Gene3D - 240 422 IPR016102 -
Phco2g02552 423 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 4 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02552 Phco-Chr2 55377317 55381581 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02552 2 55377317 55381581 Phco2g02552 2 55377317 55381581 ECH