Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02547 ATGGGCGGAGATGGAGCGACGGCGAACGCGGAGGCGCAGTACGCCTCGGCGAAGATATCGGTGTGGTGGGACATCGAAAACTGCCATGTGCCCAAGGGTTCTGATCCGCACGCGATCGCGCAGAACATCAGCTCTGCGCTGGTCCGCATGAACTACTGTGGCCCCGTCTCCATCTCCGCCTACGGAGACACCACCACGCGCATCCCAGCCTCTGTACAGCACGCGCTCTCCAGCACCGGAATTGCCCTCAACCACGTCCCTGCCGGCGTGAAAGATGCAAGTGACAAGAAGATTCTTGTTGATATGCTATTCTGGGCAGTGGACAATCCCGCACCCGCTAATTATTTATTAATTTCGGGTGACCGAGACTTCTCAAATGCTCTCCATCAACTTCGGATGAGGAGATATAATATTCTTCTTGCACAACCTCATAAGGCATCAGCACCCTTGGTGGCTGCTGCCAAGAGTGTATGGCTTTGGACTAGCCTCTTAGCTGGAGGACCTCCTCTGTCTAATGGTGAATCACAACAACTTGGTAATGGTAGCATTAGCCATGTATCATCTTCTGACTCCTCACAAATTCCAGCTACAAGTGCTGCTCAGATGCAGCAACGGGTGGAATCCTATTCAGAAGTTCATGTAGGAAATTCAAAATTTCCAAATGGAGGCAGGGGATTGGACACTAGGTTTCAGGGTAAACCTAATTGGAGAAACCCAAGTCAATCAAATGCACCCAGAGCCATGAATCCACCACCACCACCACCTGGAATTCAAGATAATCGTAATCGTAATCGTAATAGTATAAACTCTTATCGACCTGGCAACTTTAATCCAAATGTTCCGCTGAGTGGATCTGCTACAAATTATGTTCATGGCAATACTGATCAGTTATGGAGCAATAACAGTAATCTACAGGGCAATCATCAAGTTCCTTATTCCCAGCCATTAAGACCAAACAACTTCCCATTGCAACCTCCTTTTGCACCTAGTAATTCATATACTCCAACTTCTCATACTTTTGCAAGTCCGATGATCCCACCTAGTAGGACTGGTGGTCCCAATTTCAACTCTGGGCCACATACCAACGTGCCAGATATTGGTAATCTGAACATTTCGGGATATCCTGATAGTGTTCATAACCCACTTCAACAACAGAATGGAGATTTGAAACATAATCCTAATAGTAGTGCTCCACATCTTTTAAGATCAATTGATGAAAAAAATGGACATGTGGTACATAACAGTGGCACAAAACAATTACACCAAGGTTATCAACATGGTCCAGAATATCAACCAACGCCGTTGGCAGCAATGGGTAATAATAATCCTCCTGGTAGTGGTATGTGGGGTTCTCCAGGATGTCCTAAGCCTTCTGAATATGTACAAGGCTTAATAGGGGTTGTTTTACTTGCCTTGAACTCACTAAAAAATGCAAAGATGATGCCAACTGAGGCAAATATAACTGATTGCATCCGATTTGGAGATTCCAAGCACCGCAACACTGATGTTAAGAAGGCTCTTGAAAGTGCTATTGAGCAGAATATGATCGTGAAACAGAATTTAGGTGCTTTGCCATTGTATGTTGGTAAGAATGATAAACTTTGGAAGTGCGTCAATCCATTAGGTGGTAATCCTAAGCAGCGCTCAAAAGAAACATGGGATCAAATTGAAAAGTTTTTAACAACTCCTGCAGGAAGAACAGCAATAATGGCTACACTGTGCAAGTATGAAGCAGGTATTGTGATTAAGAATATGTGCTTCAAAGATCTTGCTTTGGGTGATGTCCTTCAGATACTGAACATGTTAATTACCCATAAAAAATGGATTGCACATCATCCGTCTGGTTGGCAACCACTTAGCATTGCTCTTCCTGAGACAAACCCTGGTTCAGGGGTTGTAGCTGGAGAATAA 1911 0.4464 MGGDGATANAEAQYASAKISVWWDIENCHVPKGSDPHAIAQNISSALVRMNYCGPVSISAYGDTTTRIPASVQHALSSTGIALNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRMRRYNILLAQPHKASAPLVAAAKSVWLWTSLLAGGPPLSNGESQQLGNGSISHVSSSDSSQIPATSAAQMQQRVESYSEVHVGNSKFPNGGRGLDTRFQGKPNWRNPSQSNAPRAMNPPPPPPGIQDNRNRNRNSINSYRPGNFNPNVPLSGSATNYVHGNTDQLWSNNSNLQGNHQVPYSQPLRPNNFPLQPPFAPSNSYTPTSHTFASPMIPPSRTGGPNFNSGPHTNVPDIGNLNISGYPDSVHNPLQQQNGDLKHNPNSSAPHLLRSIDEKNGHVVHNSGTKQLHQGYQHGPEYQPTPLAAMGNNNPPGSGMWGSPGCPKPSEYVQGLIGVVLLALNSLKNAKMMPTEANITDCIRFGDSKHRNTDVKKALESAIEQNMIVKQNLGALPLYVGKNDKLWKCVNPLGGNPKQRSKETWDQIEKFLTTPAGRTAIMATLCKYEAGIVIKNMCFKDLALGDVLQILNMLITHKKWIAHHPSGWQPLSIALPETNPGSGVVAGE 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02547 636 CDD PIN_limkain_b1_N_like 18 143 - -
Phco2g02547 636 PANTHER LIMKAIN B LKAP 13 512 IPR024768 GO:0005777|GO:0010468
Phco2g02547 636 MobiDBLite consensus disorder prediction 171 215 - -
Phco2g02547 636 MobiDBLite consensus disorder prediction 349 400 - -
Phco2g02547 636 MobiDBLite consensus disorder prediction 171 324 - -
Phco2g02547 636 MobiDBLite consensus disorder prediction 259 317 - -
Phco2g02547 636 MobiDBLite consensus disorder prediction 418 453 - -
Phco2g02547 636 Pfam OST-HTH Associated domain 574 622 IPR025677 -
Phco2g02547 636 Pfam NYN domain 18 155 IPR021139 GO:0004540
Phco2g02547 636 Gene3D - 9 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02547 Phco-Chr2 55336389 55339608 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02547 2 55336389 55339608 Phco2g02547 2 55336389 55339608 ECH