Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02544 ATGGACTATCGATGGACCAATGGTAGGCAGGAAACGGGTGGCCGTGACAGGAGGCCATCTAAAAGGGAACAGGCATATCAGGACTCTGTTATTGAGGATCTGTCACAGGATTTCCGCTTGCCAATCAACCACAGGCCAACAGAAAATGTTGATCTGGACAACGTAGAGCAAGCATCTCTGGACACACAGTTAACATCATCTAATATTGGCTTTAAGCTTCTCCAGAAGATGGGATGGAAAGGAAAGGGTCTTGGGAAGGATGAACAAGGAATCACTGAGCCAATAAAATCTGGTATTAGAGATCCAAGACTGGGAATTGGTAAGCAAGAAGAAGATGATTTCTTTACTGCAGAAGAAAATATCCAGAGAAAAAAACTTGATGTTGAGTTGGAGGAGACAGAAGAACATGTGAAGAAGCGGGAGGTGTTAGCTGAACGTGAGCAAAAAATTCAAACTGAAGTGAAAGAAATCCGAAAGGTGTTTTATTGTGATCTCTGCAACAAGCAATACAAATTGGCTATGGAATTTGAAGCACACTTGAGCTCTTATGATCACAATCACAGAAAGCGATTCAAACAAATGAAGGAAATGCATGGTGGTAGTAGTCGAGATGATAGGCAAAAGCGAGAAGAACAGCGTCAAGAGAGAGAAATGGCAAAGTTTGCTCAGATTGCTGATGCTCAAAAGCAGCAACGGCTTCAACTGCAACAAGAGTCTGGATCAGGAACAGCGTCCTCTGAATCTAGAACTGCTACTGCACTTACAGATCAGGAGCAGCGAAATACTTTGAAGTTTGGGTTTTCGTCTAAAGGCAGTGCTTCCAAGATAACAGTTGGTGCCAAGAAACAAAATGTTGCAAAAAAGCAAAGTGTTCCGATCTCCTCTATATTTAGTAATGATAGCGATGAAGAATAA 915 0.4208 MDYRWTNGRQETGGRDRRPSKREQAYQDSVIEDLSQDFRLPINHRPTENVDLDNVEQASLDTQLTSSNIGFKLLQKMGWKGKGLGKDEQGITEPIKSGIRDPRLGIGKQEEDDFFTAEENIQRKKLDVELEETEEHVKKREVLAEREQKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHLSSYDHNHRKRFKQMKEMHGGSSRDDRQKREEQRQEREMAKFAQIADAQKQQRLQLQQESGSGTASSESRTATALTDQEQRNTLKFGFSSKGSASKITVGAKKQNVAKKQSVPISSIFSNDSDEE 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02544 304 SMART G-patch_5 64 109 IPR000467 GO:0003676
Phco2g02544 304 MobiDBLite consensus disorder prediction 227 298 - -
Phco2g02544 304 MobiDBLite consensus disorder prediction 194 304 - -
Phco2g02544 304 Pfam G-patch domain 67 107 IPR000467 GO:0003676
Phco2g02544 304 MobiDBLite consensus disorder prediction 9 25 - -
Phco2g02544 304 Pfam Zinc-finger double-stranded RNA-binding 161 188 IPR022755 -
Phco2g02544 304 ProSitePatterns Zinc finger C2H2 type domain signature. 163 185 IPR013087 -
Phco2g02544 304 PANTHER FINGER DOMAIN PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G04180)-RELATED 1 304 - -
Phco2g02544 304 MobiDBLite consensus disorder prediction 194 222 - -
Phco2g02544 304 SUPERFAMILY beta-beta-alpha zinc fingers 144 196 IPR036236 -
Phco2g02544 304 MobiDBLite consensus disorder prediction 1 25 - -
Phco2g02544 304 ProSiteProfiles G-patch domain profile. 66 111 IPR000467 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02544 Phco-Chr2 55308324 55311227 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02544 2 55308324 55311227 Phco2g02544 2 55308324 55311227 ECH