Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02491 ATGGGTGGCCATGCTGGCGCAACCAACTTCACGTCCTACAGGGAGGCCAAGATTTCGGTGTGGTGGGACATTCACCACTGTCGCGTTCCAAACGGCCAAGACCCTCACTCCGTCGTGCAGAACATAAACTCCGCCCTCATCAACTCCAACTACGTCGGCGCCGTCACCATCTCCGCCTACGCCGACACCACCCGCATTCCCCCGCCCATCATAAACGCCCTCTCCAGCACCGGCGTTGTCCTCAACCACGTCCCTGCTGGTGTGAAAGGGAGCGATATGAAGATTCTGGTGGACATGCTGCTATGGGCCGTGGACAATCCCGCCCCCGCTAACTACTTGCTGATATCCGACGACAGAGACTTCTCCAACGCGCTTCACCAACTTAGTATGAGAAGGTACAACATTCTCTTGGCGCATCCCTCTTCGCCGCAATTTTCTCCCTCCCTCTTCGCCGCCGCCAAAGTCGTTTGGCTCTGGTCAACCCTCTCCGCCGGCGGCCCCCCTGTCCACATCGTCGATTCTGACTCCGCTAAACCCTCCGCTCTCCCCGAACCACCTGTTCAATTCAAACCCAAAACTAAATACGCAAGAAAAAGTACTACGAAACCCCCAGTTCCGCCTCTACAAATACCTGATGAGCGTAGGAGTATAAACAATGATGTACCTAATCCGGAACCACCCCAACCACAGAGAAAGTTCGTTATCGGAGCTCCTCATGAGTTCTTTGCTAGTAAATGTAACCAGCCCGTAAACCCAATCCCAATCCCAACTAGTTCTAAGTTGAATAATGAAACTACGATTCCTCAAGATTCACGCCAACATCCTCCGAGGCAAAAGCTAATTGAAATTCCTCGTGCTGTGGATGTTGTTACTCATCCGTGGGATGATTCTAGACCAAGCATTAGCCAGCCTGAGTTCAATGTGGAGGGGCTTATTGATGTTATTGTGAGAACCCTAAACTTTCTCAAGGTTGAAATGATTGTGCCCACCGAGGCGAATGTAACCGATTCCATTCGTTATGGGGATCCCGTGTACCAGACAATTGATGTTAGGAAGGCCTTGGATTTTGCCATAAGCCAACGTAGGGTGCAAAAACGAGTCCTTGGGGCGATGTATTTGTATATTGGAAGAAATGAGGCGCTCTGGAAGTGTGTGAACCATGAAGGGGGCCATCCCGGTGATTACCCGGAAGAAACATGGTACAAAGTTAAGCAGTTCCTTACTTCATCAAGAGGGAGATCGTTGTTCTTGATTTCCCGTTGCAGATTTGAAGCATGTTTGATTCTAAAGAGATCGTGCCTTGAAGAGGTTGTATTAGGGGAGGTGCTTAAAATTCTAGAGATGTTGATCACAGTCAAGAGATGGATTATTACACATCATCATAGTGGGTGGCAGCCGATTACCATTGGACTTAAGGAGAGTAAAGGTGATGCAAATATTGATTCTGGTGATAATCTAGATCAAATATGA 1470 0.4912 MGGHAGATNFTSYREAKISVWWDIHHCRVPNGQDPHSVVQNINSALINSNYVGAVTISAYADTTRIPPPIINALSSTGVVLNHVPAGVKGSDMKILVDMLLWAVDNPAPANYLLISDDRDFSNALHQLSMRRYNILLAHPSSPQFSPSLFAAAKVVWLWSTLSAGGPPVHIVDSDSAKPSALPEPPVQFKPKTKYARKSTTKPPVPPLQIPDERRSINNDVPNPEPPQPQRKFVIGAPHEFFASKCNQPVNPIPIPTSSKLNNETTIPQDSRQHPPRQKLIEIPRAVDVVTHPWDDSRPSISQPEFNVEGLIDVIVRTLNFLKVEMIVPTEANVTDSIRYGDPVYQTIDVRKALDFAISQRRVQKRVLGAMYLYIGRNEALWKCVNHEGGHPGDYPEETWYKVKQFLTSSRGRSLFLISRCRFEACLILKRSCLEEVVLGEVLKILEMLITVKRWIITHHHSGWQPITIGLKESKGDANIDSGDNLDQI 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02491 489 CDD PIN_limkain_b1_N_like 17 140 - -
Phco2g02491 489 Gene3D - 26 161 - -
Phco2g02491 489 MobiDBLite consensus disorder prediction 175 228 - -
Phco2g02491 489 PANTHER LIMKAIN B LKAP 12 334 IPR024768 GO:0005777|GO:0010468
Phco2g02491 489 Pfam NYN domain 17 153 IPR021139 GO:0004540
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02491 Phco-Chr2 54889054 54890834 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02491 2 54889054 54890834 Phco2g02491 2 54889054 54890834 ECH