Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02483 ATGGATTCGGCGAACGGAGCAATGGCGGTGAGAGACCAACGCTTAACGGAATGGCGCATGCACCGTGGTCCCTACCTCGGAGACATTTCAGCTCTGTGTTTTCTCCACCTTCCAAATCTCTCTCTTCCTTTGCTGCTCGCAGGTTTGGGTTCTGAAATTGCGGTCTATGATTTGGAAATGAGTAAGAGAATTAGGTCCTTCTCCGTATTTGAAGGAGTTCGCGTCCACGGAATCGCTTCTAGTTTCCCACGCGGGACAATGGTTGCTGTGTTTGGGGAAACGAGAGTGAAGCTGTTTAGCTTCGAATTTGATGGCGTTTCCGGGAGCGCAGAGTTGACGCTAGTTCATTTGTTGCCGAAGTTTGGTCACTGGGTTTTGGATGTTTGCTTCCTCGAGGGATGCTTACCTCATTTCAATGTGGAGGGTCGTTTTCTGGCTGTAGGATGTAGTGATAATTCAGTTCGTGTTTGGGATATTTCTAACTCCGTTGCGGTTCTTAAGGTTCAATCTCCAGTACGGTGCCTTCTGTACTCAATGCGATTATGGGGTCACAATCTTGAAGTTCTCCGAATAGCTTCTGGTACAATATTTAACGAGATTATTGTTTGGAAAGTGACCCATCAACACAGTAAATCTTCAAGTCATCAAGAAAACCATGATCATGAGAGCATATCATCTTCTGTTTGCTGCCAGCTAAAGGATAAATTGTTTGAGGCTACTCATGTATGTAAACTTATTGGACATGAAGGTTCAATCTTCCGAATAGCATGGTCGTCTTGTGGATCTAAATTGGTATCTGTTTCTGATGACCGGAGTGCACGTGTCTGGGCTGTTTCTATTGAAAGGGAACATACATTCTGCCATGATTCCATTGCCCTTGTCTTATTTGGACATAATGCTCGGGTTTGGGACTGCTCTATTTCTGATAATTTTATTGTCACTGTTAGCGAGGATTGTACATGTCGTATTTGGGGAGTGGACGGTAAACAACTGCAAGTCATTAAGGAGCACATTGGAAGAGGTATATGGAGATGTTTGTATGACCCAAATTCATCACTGCTTATAACTGCTGGGTTTGACTCTGCTATTAAAGTACATCAACTTCATGCATCTCTGCCCATGGGCTTGGAAGCAGAACAAGGATCCCCAAGTAGAACAGAGTTGTTTTCGATTGGCATCCCTAATGTGACAGAGCATATTGGATTTATGGACAGCAAGAGTGAATATGTTCGATGTTTGCGCTTTTCCTGTCAGGATTCTCTTTATGTTGCTACCAATCATGGTTATCTCTACCATGCTAAATTATGCGATACTGGAGGTGCTCAGTGGAATCAACTTGTCCAGGTCAGCAATGGGGCACCAATTATCTGTATGGATTTATTGTCCAAGGACTCTGTTGAACATGACTGTGGTGCTGAGGATTGGATTGCTATTGGAGATGGTAAAGGAAATATGACAATTATTGAAGTTGCCAAGGATGATTGCACTCCTACAGTGAGATCGAGCTTTACTTGGCCAGCTGAAATGGAGAGACAGCTCTTGGGTACTTATTGGTGCAAATCTCTGGGATGTAGGTATGTCTTCACAGCTGATCCTAGAGGAACATTGAAACTCTGGAGATTGCCTGATCCTTCACAATCTGATCTTCAGAGCTCCATGAGGAGTAACAAATTATCACATATAGCAGAGTTCGTATCAAATTATGGAATGCGGGTAATGTGTTTGGATGCATGCATGGAGGAAGAGGTCCTAGCATGTGGAGATGTACGGGGTAATACGGTGCTGTTCCCTTTTCTAAAGAATCTGGTCCTGAGCATATCTGATGCAGAAGAAAGGAAGATAGCTCCAGTAAATAATTTCAAAGGAGTTCATGGGATTTCAAGTGTCTCCAGTGTTTCTGTGACTAAGCTTGGTTATAATCAGATAGAGATACGCTCAACTGGAGCAGATGGTTGTATATGCTATCTGGAATATGATAAAGAAATGCATAATTTGCAATTTACGGGAATGAAACAAGTTAAAGAATTGTCTTTGATTGAGTATGTTTCTGTGGATAACAAGTCCGGTGATAGATTGTCAAGCAGCTATGCAGCTGGTTTTGCATCGGTGGATTTCATCGTATGGAACTTAGTGAACGAGAATAAGGTGGTGAACATTCCATGCGGTGGATGGCGGCGTCCTCATTCCTATTATCTAGGTGATTTACCAGAGATGAAGAATTGTTTTGCCTTTGTCAAGGACGAATTGATACATATACATAGACACTGGATTCATAATAAAGATGGGAAGGTATACCCTCAAAATTTGCACATGCAGTTCCATGGTAGAGAGATACATTCCTTGTGCTTTATCTCTGATGATGTGCTTGTTGGAGATAATTTCAAGTGCACCTTATTTTCTAAATCAAGTTGGATTGTAACTGGATGTGAGGATGGAACTGTGAGGTTGACTTGGTACTCTCCAGGCACTGAAAATTGGTCCATGTCAAAACTGCTTGGAGAACATGTTGGAGGATCAGCGGTGAGATCAATTTGTTCTGTATCGAAAGTACACACAATTTCATCAGATATGGGTGATGCACCTGATGGGAGGATTGGACTGACTGCTGCTGTTGAGAACAAAGATAATCCAACATTACTGATATCTGTGGGTGCAAAGCGTGTCTTAACTTCTTGGATATTAAAAAATAGGAGGATGGACATAAAAAATGATTTCCTAATCAATCATCAATACAAATCAGAAGGAGTTGATGACTGTTTTTTGTCAAGTTTGTCCTCATCAATGACGTTCCAGTGGCTTTCCACTGATATGCCAGCCAAACATTCAATTACACATGATACTCCCAAAAATAATGTGGAGAAGATAGTTGGTGTTGCTGAAAATGTTTCTCATACAAATAATGATGCTGGAATGATTTCTGAGAGTGGAATGGCAAACTTGATCAAAGATAAACATGAAGATGACTGGAGATATCTTGCAGTCACAGCTTTTCTTGTTAGATATTCTGGTTCCAGGATATCTTTCTGTTTTGTTGTCATTGCATGTTCAGATGCTACACTTATGTTACGGGCTTTAATTTTACCCTTTCGCTTGTGGTTTAATGTCGCCGTACTAGTTCCTTCGCTGGCACCAGTTTTGTCATTGCAACATATCATATTTCCCGTGTGTATGCCTTGTAAAGATAACATCCAAGCTGGAAATGTTTATATTGTGATTAGTGGGTCTACTGATGGCAGTGTTGCTTTTTGGGACCTAACTGACAGTGTTGAAGCTTTTATGCAGCGGGTTTCAGTTTGTAATGTTGAAAAGCTTTTTGATTGTCAAAAACGACCACGCACAGGGAGAGGAAGTCAGGGCGGTAGACAGTGGAGATCCCTAAGCAGAGACTTGTCAAATAAAAGACAAGACAGCAGTCTGGTCACTTTGAAAGCCAAAGAGAAGACCAAAACACAGGGGACCCCTTACGTGCCAAGTGATTCTGAAGACCTCAAGATGGATTGTTCTCAATCCACACATATGGCTTCCCCGGAGTTAGAAAGCAAGACTGATAATTCCTCGATGGAAATATGTGAAATACAGCCTCTATGCCTTTTGAGAAAGATTCACCAATCTGGTGTCAACTGTCTCCATGTTTCAGAGATAAAGAGTGGGCAAAATACTAACAGTTGTCAAATGTACAGCATAGTTAGTGGGGGTGATGATCAAGCACTTAATCATCTAATGGTTGAATTATCACCAAAATCTATAAATTTAAATCATGGGATTTTGAGCCCAGAGATCACTCGTATTGTCTCTGTGCCTGAATATGGAAAGGATTTCAATTTTCAAAATCCGAGCAAGAAATTTAAGATTAGATTCTTAAATAACGAAAAATTACCCTCTGCCCACAGCTCTTCTGTCAAAGGTGTCTGGACAGACGGATCTTGGGTGTTTTCCACTGGACTTGATCAACGGGTCAGATGCTGGCATCTTCAGCAGAGCAAACTAAGGGAACATTCATATCTAATAGTTAGTGTTCCGGAGCCAGAAGCATTATCTGCTAGGGCCTGTGGCAGGAACCAATATCAAATTGCTGTTGCTGGAAGAGGGATGCAAATAATTGATTTTTCTGAATCTTGA 4119 0.4156 MDSANGAMAVRDQRLTEWRMHRGPYLGDISALCFLHLPNLSLPLLLAGLGSEIAVYDLEMSKRIRSFSVFEGVRVHGIASSFPRGTMVAVFGETRVKLFSFEFDGVSGSAELTLVHLLPKFGHWVLDVCFLEGCLPHFNVEGRFLAVGCSDNSVRVWDISNSVAVLKVQSPVRCLLYSMRLWGHNLEVLRIASGTIFNEIIVWKVTHQHSKSSSHQENHDHESISSSVCCQLKDKLFEATHVCKLIGHEGSIFRIAWSSCGSKLVSVSDDRSARVWAVSIEREHTFCHDSIALVLFGHNARVWDCSISDNFIVTVSEDCTCRIWGVDGKQLQVIKEHIGRGIWRCLYDPNSSLLITAGFDSAIKVHQLHASLPMGLEAEQGSPSRTELFSIGIPNVTEHIGFMDSKSEYVRCLRFSCQDSLYVATNHGYLYHAKLCDTGGAQWNQLVQVSNGAPIICMDLLSKDSVEHDCGAEDWIAIGDGKGNMTIIEVAKDDCTPTVRSSFTWPAEMERQLLGTYWCKSLGCRYVFTADPRGTLKLWRLPDPSQSDLQSSMRSNKLSHIAEFVSNYGMRVMCLDACMEEEVLACGDVRGNTVLFPFLKNLVLSISDAEERKIAPVNNFKGVHGISSVSSVSVTKLGYNQIEIRSTGADGCICYLEYDKEMHNLQFTGMKQVKELSLIEYVSVDNKSGDRLSSSYAAGFASVDFIVWNLVNENKVVNIPCGGWRRPHSYYLGDLPEMKNCFAFVKDELIHIHRHWIHNKDGKVYPQNLHMQFHGREIHSLCFISDDVLVGDNFKCTLFSKSSWIVTGCEDGTVRLTWYSPGTENWSMSKLLGEHVGGSAVRSICSVSKVHTISSDMGDAPDGRIGLTAAVENKDNPTLLISVGAKRVLTSWILKNRRMDIKNDFLINHQYKSEGVDDCFLSSLSSSMTFQWLSTDMPAKHSITHDTPKNNVEKIVGVAENVSHTNNDAGMISESGMANLIKDKHEDDWRYLAVTAFLVRYSGSRISFCFVVIACSDATLMLRALILPFRLWFNVAVLVPSLAPVLSLQHIIFPVCMPCKDNIQAGNVYIVISGSTDGSVAFWDLTDSVEAFMQRVSVCNVEKLFDCQKRPRTGRGSQGGRQWRSLSRDLSNKRQDSSLVTLKAKEKTKTQGTPYVPSDSEDLKMDCSQSTHMASPELESKTDNSSMEICEIQPLCLLRKIHQSGVNCLHVSEIKSGQNTNSCQMYSIVSGGDDQALNHLMVELSPKSINLNHGILSPEITRIVSVPEYGKDFNFQNPSKKFKIRFLNNEKLPSAHSSSVKGVWTDGSWVFSTGLDQRVRCWHLQQSKLREHSYLIVSVPEPEALSARACGRNQYQIAVAGRGMQIIDFSES 1372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02483 1372 Gene3D - 3 235 IPR015943 GO:0005515
Phco2g02483 1372 PANTHER WD REPEAT PROTEIN 22 1371 - -
Phco2g02483 1372 ProSiteProfiles Trp-Asp (WD) repeats profile. 245 276 IPR001680 GO:0005515
Phco2g02483 1372 ProSiteProfiles Trp-Asp (WD) repeats profile. 138 167 IPR001680 GO:0005515
Phco2g02483 1372 ProSiteProfiles Trp-Asp (WD) repeats profile. 1071 1093 IPR001680 GO:0005515
Phco2g02483 1372 SUPERFAMILY WD40 repeat-like 454 1330 IPR036322 GO:0005515
Phco2g02483 1372 Pfam WD domain, G-beta repeat 296 324 IPR001680 GO:0005515
Phco2g02483 1372 Pfam WD domain, G-beta repeat 122 158 IPR001680 GO:0005515
Phco2g02483 1372 Pfam WD domain, G-beta repeat 242 276 IPR001680 GO:0005515
Phco2g02483 1372 MobiDBLite consensus disorder prediction 1118 1180 - -
Phco2g02483 1372 SUPERFAMILY WD40 repeat-like 523 1093 IPR036322 GO:0005515
Phco2g02483 1372 SMART WD40_4 1045 1084 IPR001680 GO:0005515
Phco2g02483 1372 SMART WD40_4 288 325 IPR001680 GO:0005515
Phco2g02483 1372 SMART WD40_4 498 540 IPR001680 GO:0005515
Phco2g02483 1372 SMART WD40_4 327 367 IPR001680 GO:0005515
Phco2g02483 1372 SMART WD40_4 765 818 IPR001680 GO:0005515
Phco2g02483 1372 SMART WD40_4 111 158 IPR001680 GO:0005515
Phco2g02483 1372 SMART WD40_4 1280 1323 IPR001680 GO:0005515
Phco2g02483 1372 SMART WD40_4 238 277 IPR001680 GO:0005515
Phco2g02483 1372 Gene3D - 473 898 IPR015943 GO:0005515
Phco2g02483 1372 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 245 276 - -
Phco2g02483 1372 Gene3D - 1043 1340 IPR015943 GO:0005515
Phco2g02483 1372 Gene3D - 236 451 IPR015943 GO:0005515
Phco2g02483 1372 MobiDBLite consensus disorder prediction 1111 1180 - -
Phco2g02483 1372 SUPERFAMILY WD40 repeat-like 25 367 IPR036322 GO:0005515
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02483 2 54840037 54852603 Phco2g02483 2 54840037 54852603 ECH