Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02481 ATGGATGACTGTTGTGCTGTTTGCGCAGAGCCTTTGGAATGGGTCGCCTACGGACCCTGTTTGCACCGGGAGGTGTGCTCCACGTGCGTCGCTCGCCTCCGTTTCATATGCGACGATCGCCGTTGCTGCATCTGCAAGACCGAATGCAACCTTGTATTCGTGACCAAGGCTCTAGGAGATTATACGAAGGTGATTAATGACTTTGCTGCCCTTCCTTCAGAGGTAAGGGAGGGCAAGATTGGATCATATTGGTACCATGAGGATACAAATGCATTTTTTGATGATGTGGACCATTACAAGATGATCAAGGCTATGTGTAGACTTTCGTGCAGTGTATGTGACAAGATGGAGGAGCAACCACAGGATGCTGCTTCAAGGCGACGTGCTAAGTTTAGGAATATAGGGCAGTTGAAGGGTCATTTATTCCACCGTCACAAGTTGCATATGTGCGGTTTGTGTTTGGAGGGCAGAAAGGTTTTTATATGTGAGCAAAAGCTATATACCAGAACACAGTTGAATCAACACATAAACACAGGTGATTCTGAGGTGGATGGAAGTGAGAGTGAGAGAGGTGGTTTCATGGGGCATCCAATGTGTGAATTCTGCAGAACCCCATTTTATGGAGACAATGAATTATATATGCATATGTCTACAGAACATTATACTTGTCATATATGCCAAAGGCAGCATCCAGGGCAGTATGAGTACTATAAGAATTATGATGACCTAGAGATTCACTTCCGTCAAGAGCACTTCTTATGTGAAGATGAGGCTTGTCTTGCGAAGAAATTTGTTGTTTTTCAATCTGATCAAGAGATGAAGAGGCATAATGCTATCGAACATGGAGGACGGATGTCACGATCTAAGCGTAATGCTGCTCTTCAGATTCCAACTAGTTTTCGATACAGACACGGTAATGAACATGAGCAACGCCGTGGAAGAAATCGTTCGTTTCGTCGTGATTTTACTGAAAATCAACTTTCTATGGCCATTGAAGCTAGTCTAGAAACAGCTAATACAGAGCAAACATTTCGTGATCAATCGGCATCAGGTAGTGGGCGAGTTGCTGTTGATGATGACAATGGTGATATTGATTCTCTCATTCAGCCATTTGAATCATTAGCTGCAGCTGGTTCTGAAGCATCTTCAAGATACCTTCAAGCCTTGGGGCATAGCTCAAGAAGTGGACCTCTGGAGGATTCTTCCTTTCCACCACTACCCATAACTTCCAACAATGGCCAGCAAGGATCCAAACATGAATTGGAAGGCTCATCTAGTAACTCCATGGCTGCACGTCTGCGTCGTCGTAACAACAAAACTGTAACTGTTATTAATTCTGGTAATGCCTGGCCAGCAGCTAGTCGTGGACTGGTACAGCCATCAAGTAATTCTTTGCAATTTAGACCGTCGTCAAATAATGTCCCGGGTCTTTCTCGTAATTCTGGGCAGACAAAGAAGACAGTGATTAACAGTGGACTTTCACCATCAACTTATGCTGGTTCTATTCAGTCTACACAAAGAACTGCTCATGGACAATTACCTGGTGGTTCATCGAGGGATACGCGTGACAATGTTAGAATTGTTCACTCTGCATCTGCCCCAAATCTCATGGAGAACAACTCTGTCGAAGCTTCAATATCTGATTTTCCTCCTGTTTCAGCTGCACAAGCGAGCAAGTTACCTGCTAGCAGTCAGTCTTCATTGAATGTGGAAAATGTTCAGTCTGCTAACAAGTCTCTGGTTGAAAAGATTCGTGGTGCTCTTGATTTTGACGAAGGAAGATACGGTATGTTTAAGGACATATCTGCCCAATATCGCCAAGGCACAATAGATACAGGCACGTATCTGGACTATGTGCAGAAGTTTGGCTTGTCTCATCTTGTGCTTGAGTTGGCAAGACTATGCCCGGATATTCAGAAGCAGACAGAGCTTGTTGAGGCTTACAGCGCTACTTTGCAAAGAGATGCTTTAGTGGAAAATAACTTGGTTCGAAGCAGTGCTAGCGCCCATCGCAAAGACAGTAATGTAAACAAGAAAGGTAAAGGTAAGTCTATAGATAGTAGGGGGAGTAACTCCACTGAGAAATTAGCAGATAACTTTTTAAGCACCGTACATCAGCTACAGGCAAATTATAAATCTTCAGAAGAGAAGGCGGAGGTGCTATCAAGGGGTGATTACCGAAGTGACAGGGGCAAATTAAAAATCGAGCAGCGGATTGATACAAATTCTGGAAGTCAACCTGCAGTGAAGCTTAGTGGGAAGACTGAGACATCAAATGGCAGTTTATCTACTCAAATTAGAGAGGATGGTGGTGGTGGGAACAAGCAACGTAAGAAAGGTTCAAAGTTCCTTAGAGTGCGGCTTGGTGATGGTCCTGCTTCGGCCCTTGATCAATCAGATCCTGGAACAACAGATGGCTCAGAAGTTAACAAGAATGAATCTGGAGGAGGGCTACCTGTGCGTGGGGTTTGGCGAAAAGGGGGGGGTCAGAAACTTTTTCCCTAA 2505 0.4435 MDDCCAVCAEPLEWVAYGPCLHREVCSTCVARLRFICDDRRCCICKTECNLVFVTKALGDYTKVINDFAALPSEVREGKIGSYWYHEDTNAFFDDVDHYKMIKAMCRLSCSVCDKMEEQPQDAASRRRAKFRNIGQLKGHLFHRHKLHMCGLCLEGRKVFICEQKLYTRTQLNQHINTGDSEVDGSESERGGFMGHPMCEFCRTPFYGDNELYMHMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRQEHFLCEDEACLAKKFVVFQSDQEMKRHNAIEHGGRMSRSKRNAALQIPTSFRYRHGNEHEQRRGRNRSFRRDFTENQLSMAIEASLETANTEQTFRDQSASGSGRVAVDDDNGDIDSLIQPFESLAAAGSEASSRYLQALGHSSRSGPLEDSSFPPLPITSNNGQQGSKHELEGSSSNSMAARLRRRNNKTVTVINSGNAWPAASRGLVQPSSNSLQFRPSSNNVPGLSRNSGQTKKTVINSGLSPSTYAGSIQSTQRTAHGQLPGGSSRDTRDNVRIVHSASAPNLMENNSVEASISDFPPVSAAQASKLPASSQSSLNVENVQSANKSLVEKIRGALDFDEGRYGMFKDISAQYRQGTIDTGTYLDYVQKFGLSHLVLELARLCPDIQKQTELVEAYSATLQRDALVENNLVRSSASAHRKDSNVNKKGKGKSIDSRGSNSTEKLADNFLSTVHQLQANYKSSEEKAEVLSRGDYRSDRGKLKIEQRIDTNSGSQPAVKLSGKTETSNGSLSTQIREDGGGGNKQRKKGSKFLRVRLGDGPASALDQSDPGTTDGSEVNKNESGGGLPVRGVWRKGGGQKLFP 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02481 834 PANTHER ZINC FINGER PROTEIN 598 1 737 IPR044288 GO:0061630|GO:0072344
Phco2g02481 834 MobiDBLite consensus disorder prediction 732 834 - -
Phco2g02481 834 MobiDBLite consensus disorder prediction 664 692 - -
Phco2g02481 834 MobiDBLite consensus disorder prediction 797 811 - -
Phco2g02481 834 ProSiteProfiles Zinc finger RING-type profile. 5 46 IPR001841 -
Phco2g02481 834 MobiDBLite consensus disorder prediction 337 361 - -
Phco2g02481 834 MobiDBLite consensus disorder prediction 452 524 - -
Phco2g02481 834 MobiDBLite consensus disorder prediction 391 433 - -
Phco2g02481 834 MobiDBLite consensus disorder prediction 455 519 - -
Phco2g02481 834 MobiDBLite consensus disorder prediction 671 685 - -
Phco2g02481 834 CDD RING-HC_ZNF598 3 54 IPR041888 -
Phco2g02481 834 MobiDBLite consensus disorder prediction 738 770 - -
Phco2g02481 834 SMART c2h2final6 252 281 IPR013087 -
Phco2g02481 834 SMART c2h2final6 108 145 IPR013087 -
Phco2g02481 834 SMART c2h2final6 221 251 IPR013087 -
Phco2g02481 834 SMART c2h2final6 197 220 IPR013087 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02481 2 54834422 54838207 Phco2g02481 2 54834422 54838207 ECH