Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02457 ATGACTCCTCCGAACGATCCAGTGAATGCCACGTTACGACCGGAGTCACTGGAAAAGGTTTTCGACTTATCTGACGGGAAATTCACCGTGAGAGGTGTGCCGTTACTCTCTCACGTACCCGAGAACGTCACTTTCAGCTCCTTCTCCTCAATCTGTGAACCTCGTGACGCCCCACCTTCCATCCTTCAACGTGTCATTGCCGAGTCACACAAAGGTGGCTTCCTCGGATTCTCCCATGTTTCACCCTCCGACAGATTGATAAACTCCTTGGGAAGTTTCAGTGGCAGAAACTTCGTTAGCATCTTCAGGTTCAAAACATGGTGGTCTACCCAATGGGTCGGAAATTCCGGTTCAGACATACAAATGGAAACTCAGTGGGTCCTAATGGAAGTCCCCAAAACAGAATCCTATGTCGTGATCATTCCCATTATAGAAAAAAGTTTCAGGTCCGCCCTTCACCCTGGCTCTGATGACCATATCATGATTTGCGCGGAGAGTGGTTCTACTCAGGTGAGAGCATCGAGTTTCGGTGCAATTGCATATGTCCACGTGGCTGAAAACCCTTACAACTTGATGAGAGAGGCCTATAGTGCTCTCAGGGTTCACCTTAACTCGTTTAGGTTGTTGGAGGAGAAAACGGTGCCAAGAATTGTTGATAAATTCGGGTGGTGCACTTGGGATGCCTTTTACTTAACCGTGAACCCTGTTGGGGTTTGGCATGGGCTAAAGGATTTTAGTGAGGGTGGCGTGGCTCCGAGGTTTGTTGTCATTGATGATGGTTGGCAAAGTGTGAATTTTGATGATGGTGACCCCAACGAGGATGCTAAGAATCTTGTTCTTGGTGGGGAACAGATGACTACGAGGCTTCATAGGTTTGAAGAAGGCGACAAGTTTAGAAAATACCAAAAGGGGCTTCTCTTGGGTCCTAATGCTCCTTCTTTCAACCCGGAGACGATTAAGGAGTTGATTTCGAAGGGGATTGAAGCTGAGCATTTGGGGAAGCAACGTGATGCGGCTATTTCAGCTGGGGGTTCGGATTTGGCCGAGATAGAGTTGATGATTGTGAAGGTGAGAAAGGAAATTGATGATCTTTTTGGGGGGAAGGGAAAGCAGAGCAACGAAAGTGGAGGGTGTTGTTGCAAAGCACCGGAGTGTGGTGGGATGAAGGATTTCACGAGCGACTTGAGGACTGCATTCAAAGGTTTGGATGATGTTTATGTGTGGCATGCGCTCTGTGGCGGATGGGGTGGTGTGAGGCCAGGAGCTACACATCTGGATTCGAAAATAACACCATGCAAACTCTCTCCTTGCCTTGATGGGACCATGCAAGATCTAGCAGTACTTAAAATAGTGGAAGGTTCCATAGGCCTTGTTCATCCTCACCAAGCTAATGATCTCTACGATTCCATGCACTCTTATCTTGCCCAAGCCGGTGTTACTGGAGTCAAAATTGACGTCATTCATAGTCTTGAATACATATGCGAGGAATATGGGGGCAGAGTGGAGATTGCCAAGGCTTATTACGATGGGTTGTCAAACTCCATTTTCAAAAATTTCAATGGAAGTGGAATCATCGCTAGCATGCAGCAGTGCAACGATTTCTTCTTCCTTGGAACCAAGCAAATTCCTTTGGGAAGAGTTGGGGATGACTTTTGGTTCCAAGATCCCAATGGGGACCCAATGGGAGTGTTCTGGCTACAGGGGGTGCACATGATTCACTGTTCCTACAACAGCCTTTGGATGGGACAGATAATTCAACCCGATTGGGACATGTTTCAATCGGATCATGAGTGTGCCAAATTTCATGCTGGTTCAAGGGCTATTTGTGGTGGTCCTGTCTATGTGAGTGATAGTGTTGGCTCTCATGATTTTGATCTCATTAAGAAGCTTGTCTTCCCTGATGGTACCGTGCCCAAGTGTATATATTTTCCCCTTCCAACAAGAGACTGCCTTTTTAGGAACCCTCTCTTTGACCAAATAACCGTTCTCAAAATTTGGAACTTCAATAAGTATGGAGGAGTTATTGGTGCTTTCAACTGCCAAGGGGCTGGTTGGGACCCAAAGGAGAAAAAATTCAGGGGTTTCCCAGAGTGCTACAAACCAATATCATGCACTGTTCATGTAACTGAGGTTGAATGGGACCAAAAGAAAGAAGCAGCCCATATGGGTAAGGCAGAGGAGTATGTTGTGTACCTCAATCAGGCGGAGGTACTGCATTTCATGAATCCCAACTCTGAAGCACTGCAATTAACTATTCAACCTTCCACTTTTGAAATCTGCAACTTTGCCCCAGTCGAAAAGCTAGGTGGCAACATAAAATTTGCACCCATTGGGCTCACAAACATGTTCAACAGTGGAGGGACAATTCAAGAATTGAAGTATATTGAGAAGGGTGTTAAGATCAAGGTTAAGGGTGGTGGGAGACTCCTCGCTTACTCAACTCAATCTCCAAAGAAGTTCCGACTCAATGGTTCTGATGTTGTTTTTGAGTGGCTGCCTGATGGCAAACTCACTGTCAACCTTCCTTGGATTGAAGAGAATGGCGGGGTTTCTGATCTGGCAATTTTCTTCTAG 2574 0.4627 MTPPNDPVNATLRPESLEKVFDLSDGKFTVRGVPLLSHVPENVTFSSFSSICEPRDAPPSILQRVIAESHKGGFLGFSHVSPSDRLINSLGSFSGRNFVSIFRFKTWWSTQWVGNSGSDIQMETQWVLMEVPKTESYVVIIPIIEKSFRSALHPGSDDHIMICAESGSTQVRASSFGAIAYVHVAENPYNLMREAYSALRVHLNSFRLLEEKTVPRIVDKFGWCTWDAFYLTVNPVGVWHGLKDFSEGGVAPRFVVIDDGWQSVNFDDGDPNEDAKNLVLGGEQMTTRLHRFEEGDKFRKYQKGLLLGPNAPSFNPETIKELISKGIEAEHLGKQRDAAISAGGSDLAEIELMIVKVRKEIDDLFGGKGKQSNESGGCCCKAPECGGMKDFTSDLRTAFKGLDDVYVWHALCGGWGGVRPGATHLDSKITPCKLSPCLDGTMQDLAVLKIVEGSIGLVHPHQANDLYDSMHSYLAQAGVTGVKIDVIHSLEYICEEYGGRVEIAKAYYDGLSNSIFKNFNGSGIIASMQQCNDFFFLGTKQIPLGRVGDDFWFQDPNGDPMGVFWLQGVHMIHCSYNSLWMGQIIQPDWDMFQSDHECAKFHAGSRAICGGPVYVSDSVGSHDFDLIKKLVFPDGTVPKCIYFPLPTRDCLFRNPLFDQITVLKIWNFNKYGGVIGAFNCQGAGWDPKEKKFRGFPECYKPISCTVHVTEVEWDQKKEAAHMGKAEEYVVYLNQAEVLHFMNPNSEALQLTIQPSTFEICNFAPVEKLGGNIKFAPIGLTNMFNSGGTIQELKYIEKGVKIKVKGGGRLLAYSTQSPKKFRLNGSDVVFEWLPDGKLTVNLPWIEENGGVSDLAIFF 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02457 857 PANTHER - 21 847 IPR008811 -
Phco2g02457 857 SUPERFAMILY (Trans)glycosidases 217 630 IPR017853 -
Phco2g02457 857 Pfam Raffinose synthase or seed imbibition protein Sip1 21 840 IPR008811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02457 Phco-Chr2 54632275 54635196 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02457 2 54632275 54635196 Phco2g02457 2 54632275 54635196 ECH