Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02417 ATGGTCAAAACGGCGTCGTCCCCTTCTTCCTCTCCGGTCACCATTACGGTGTCCTCCGGAGGACGACGTAGAAGCATGGGACTAACCAGTCCCGTTCCTCGCGCCTCAGTCTCCACCAACAACCCCACTTCTCCTCTCCGAGCTTCCGGCGGAGGTAGGAGACTCTCCGGCGCCGGCGCTTCCAAAGGCGGTGGCATCGAAGAAATGAACTCTGAGTACGTGACGTACACCGTTCACATACCCCCGACGCCGGACCGCAAGCCCCTGACAATCTCGGAAGACGGAAAAGGAAGCACGAGTTTCATCTCCGGCACGATCTTCACTGGAGGCTACAACTCCGTGACGCGTGGCCAGTCCTCCGTGGAAATCGAAGCGCGGCCGAAATCCGCGTCGGTTTGCGGAAAGAAGGGTTGCGACGAGGAAGCAATGAAAGGCTTGTGTGATCCGTGCGAGTGCGGGTTCAAGATCTGCAGGGAGTGTTACTTGGAGTGTGGTGGGAACAATGGTGGAGGAAAGTGCCCAGGGTGCAAATTGCTTTATAAGTATGCGAGTGATGATGAAGATAATGAAGAGGGAGAGGGGTCTGAGGGTGATGATCAGCCTCTGCCTCTGCCTTCCATGGCTGAGGTCAAGTTGGACAAGAGGTTTTCTCTTGTGAAATCCTTCAAAGCGCAGAATCATCCTCAGGAATTTGACCACACGCGATGGCTGTTTGAGACGAAGGGGACATATGGCTATGGAAACGCTGTGTGGCCTAAAGATGGTTACGGTGCTAACGGGTTTGGACCCCCACCGGATTTTGGAAAGAAAGCGAAGAGACCCTTGACCCGCAAGGTTGGAGTTTCAGCTGCTATTCTCAGTCCTTATAGGATGCTTATTCTGCTGCGTCTTGTTGCTTTGGGTTTATTTCTTACATGGAGGATAAGACATCCAAACCATGAAGCGATTTGGCTGTGGGCAATGTCTATAACTTGTGAGCTATGGTTTGCATTTTCTTGGATTCTTGATCAGCTTCCTAAGCTGTGTCCCGTGAACAGAGTCACTGATCTATCTGTTCTGAAAGAGCAGTTTGAGTCTCCAAACCTGCGCAATCCAAAAGGAAGATCTGATCTACCAGGAATTGATGTGTTTGTTTCCACGGCAGACCCTGAAAAGGAGCCTCCTCTTGTGACCGCCAACACCATTCTCTCCATCCTTGCAGTTGATTATCCAGTGGAGAAGGTTGCCTGTTACTTGTCTGATGATGGTGGAGCTTTGTTGACATTTGAAGCTCTTGCTGAGACTGCTAGTTTTGCTAGAATTTGGGTTCCTTTCTGTCGTAAGCACCATATAGAACCCCGAAATCCTGAAGCTTATTTTGGGCAGAAACGTGATTTCCTCAAGAACAAGGTCCGGTTGGACTTTGTGAGAGAGAGGAAAAGGGTAAAGAGGGAATATGATGAGTTCAAAGTGAGGATAAACTCCTTGCCGGAGTCCATCAGGAGAAGATCCAATGCTTACAATGCTCACGAGGAGCTACGAGTCAAGAAGAAACAGATGGAAACAGATGCCAATGTCTCCGATCCCGTTAAGGTTCCTAAAGCTACGTGGATGTCCGATGGTTCTCATTGGCCAGGGACTTGGGCATCAGCGGAACAAGACCACTCGAGGGGGGACCATGCTGGCATAATTCAGGCAATGTTAGCTCCACCAAATGCAGAACCGGAATTTGGTGCAGGAGATGATGGAGATAACTTGATTGATACAACAGATGTTGATATTAGGTTGCCCATGCTTGTTTACGTGTCTCGTGAAAAGAGGCCAGCATATGACCACAACAAGAAAGCAGGGGCAATGAATGCTCTTGTTCGCACCAGTGCTATCATGTCTAATGGGCCATTCATTCTGAATCTTGATTGTGATCATTACATCTACAACTCCTTGGCTCTAAGAGAAGGTATGTGCTTTATGCTTGATAGGGGTGGTGATAGGATATGCTACGTTCAGTTTCCTCAAAGGTTTGAGGGCATTGACCCCAGTGACAGATATGCAAATCACAACACTGTGTTCTTTGATGTGAGCATGAGAGCTCTTGATGGCTTACAAGGCCCCATGTACGTGGGAACAGGCTGCATATTCAGAAGAACAGCTCTGTATGGATTTAGTCCTCCTAGAGCTACAGAACATCATGGGTGGCTTGGCAGGAAGAAAATTAAGCTGTTTCTGAGAAAACCAAAGGTCTCAAAAAAGGAAGAGGATGAAGTTTCTGTGCCAATAAATTGTGATCACAATGATGATGATGCAGACATAGAGTCCTTGCTTCTTCCCAAAAGATTTGGGAATTCTACTTCTCTTGCTGCATCCATTCCTGTGGCGGAATACCAGGGAAGGTTGCTTCAAGATTTGCAAGGAAAGGGAACACATGGAAGGCCAGTAGGTTCTCTTGCTGTGCCTCGTGAGCCATTGGATGCGGCCACTGTTGCTGAGGCAATAACTGTAATATCTTGTTTCTATGAAGATAAAACTGAATGGGGCAAACGAGTGGGGTGGATATATGGTTCAGTTACAGAAGATGTGGTAACTGGTTACAGAATGCACAATAGAGGGTGGAGATCAGTGTACTGTGTAACCAAAAGGGATGCTTTTAGAGGATCAGCTCCAATCAATTTAACAGACAGGCTCCATCAAGTGCTTCGATGGGCTACAGGTTCCGTTGAAATCTTCTTTTCAGCTAACAATGCGTTATTAGCTAGTCCTAGAATGAAGTTCCTGCAGAGAGTGGCATATCTAAATGTAGGAATGTACCCTTTCACCTCAATGTTTTTGATAGTCTATTGCTTTCTACCTGCAATGTCTCTATTTTCGGGTCAGTTTATAGTCCAATCTCTCAGTGTAACTTTTTTAGTATTCTTGCTGGGTATCACAATCACACTGTGTTTGCTTGCACTGCTGGAGATCAAATGGTCAGGAATCACTCTGCATGATTGGTGGAGAAATGAACAATTCTGGCTAATTGGTGGAACAAGTGCACACGCTGCTGCTGTTTTACAAGGGTTACTGAAGGTAATAGCAGGAGTGGAGATATCATTCACTTTAACTTCGAAGTCAGCCACTCCAGAAAATGAAGAGGATGAGTTTGCTGACCTCTATGAGGTGAAGTGGAGCTTTCTAATGATCCCTCCCATTACTATTATGATGGTGAACGCCATTGGTATTGCTGTAGGAGTAGCTAGGACCATGTACAGTCCCTTTCCACAATGGAGCAGACTAGTAGGAGGGGTGTTTTTCAGTTTCTGGGTCTTGTGCCACCTTTATCCTTTTGCAAAGGGCCTCATGGGAAGAAGAGGAAAGATTCCTACCATCATTTATGTCTGGTCTGGATTACTCTCCATTATTATTTCTTTGCTCTGGGTCTACATAAACCCTCCTTCAGGAAGAACAGAAGATTATATGAATTTCAAATTTCCTTGA 3450 0.4661 MVKTASSPSSSPVTITVSSGGRRRSMGLTSPVPRASVSTNNPTSPLRASGGGRRLSGAGASKGGGIEEMNSEYVTYTVHIPPTPDRKPLTISEDGKGSTSFISGTIFTGGYNSVTRGQSSVEIEARPKSASVCGKKGCDEEAMKGLCDPCECGFKICRECYLECGGNNGGGKCPGCKLLYKYASDDEDNEEGEGSEGDDQPLPLPSMAEVKLDKRFSLVKSFKAQNHPQEFDHTRWLFETKGTYGYGNAVWPKDGYGANGFGPPPDFGKKAKRPLTRKVGVSAAILSPYRMLILLRLVALGLFLTWRIRHPNHEAIWLWAMSITCELWFAFSWILDQLPKLCPVNRVTDLSVLKEQFESPNLRNPKGRSDLPGIDVFVSTADPEKEPPLVTANTILSILAVDYPVEKVACYLSDDGGALLTFEALAETASFARIWVPFCRKHHIEPRNPEAYFGQKRDFLKNKVRLDFVRERKRVKREYDEFKVRINSLPESIRRRSNAYNAHEELRVKKKQMETDANVSDPVKVPKATWMSDGSHWPGTWASAEQDHSRGDHAGIIQAMLAPPNAEPEFGAGDDGDNLIDTTDVDIRLPMLVYVSREKRPAYDHNKKAGAMNALVRTSAIMSNGPFILNLDCDHYIYNSLALREGMCFMLDRGGDRICYVQFPQRFEGIDPSDRYANHNTVFFDVSMRALDGLQGPMYVGTGCIFRRTALYGFSPPRATEHHGWLGRKKIKLFLRKPKVSKKEEDEVSVPINCDHNDDDADIESLLLPKRFGNSTSLAASIPVAEYQGRLLQDLQGKGTHGRPVGSLAVPREPLDAATVAEAITVISCFYEDKTEWGKRVGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDAFRGSAPINLTDRLHQVLRWATGSVEIFFSANNALLASPRMKFLQRVAYLNVGMYPFTSMFLIVYCFLPAMSLFSGQFIVQSLSVTFLVFLLGITITLCLLALLEIKWSGITLHDWWRNEQFWLIGGTSAHAAAVLQGLLKVIAGVEISFTLTSKSATPENEEDEFADLYEVKWSFLMIPPITIMMVNAIGIAVGVARTMYSPFPQWSRLVGGVFFSFWVLCHLYPFAKGLMGRRGKIPTIIYVWSGLLSIIISLLWVYINPPSGRTEDYMNFKFP 1149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02417 1149 SUPERFAMILY Nucleotide-diphospho-sugar transferases 389 941 IPR029044 -
Phco2g02417 1149 MobiDBLite consensus disorder prediction 1 47 - -
Phco2g02417 1149 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 273 1119 - -
Phco2g02417 1149 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 573 723 IPR029044 -
Phco2g02417 1149 MobiDBLite consensus disorder prediction 1 66 - -
Phco2g02417 1149 FunFam cellulose synthase-like protein D3 579 716 - -
Phco2g02417 1149 Pfam Cellulose synthase 374 1141 IPR005150 GO:0016020|GO:0016760|GO:0030244
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02417 Phco-Chr2 54347870 54351984 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02417 2 54347870 54351984 Phco2g02417 2 54347870 54351984 ECH