Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02407 ATGCTTAAAGGTGCTTCCCCTTCACCGTCCCTGATAAGCTTGGCTTCACCAACATTTGCAGCAAAAATGGTTTCGCTCAAACTGCAGAAGCGTCTCGCTGCAAGCGTTCTCAAGTGCGGCAGAGGAAAGGTTTGGCTTGACCCAAATGAAGTCAACGAAATCTCCATGGCCAATTCTCGTCAGAACATAAGGAAGCTGGTTAAGGATGGGTTTATTATCAGGAAACCCACCAAGATTCACTCTCGCTCACGTGCCCGTCGAATGAAGGAGGCCAAGAGAAAAGGACGTCACTCTGGATATGGTAAGCGTAAGGGTACAAGGGAGGCAAGGCTTCCCACTAAAATCCTTTGGATGAGGAGAATGCGTGTGCTCAGACGCTTGCTTCGCAAGTACAGGGAGTCGAAGAAGATTGACAAACACATGTACCATGACATGTACATGAAGGTTAAGGGTAATGTTTTCAAGAACAAGAGGGTTTTGATGGAAAGCATACACAAGTCCAAAGCTGAGAAGGCAAGAGAGAAGACCTTATCCGATCAGTTTGAGGCCAAGCGTGCCAAGAACAAGGCCAGCAGAGAAAGGAAAATTGCCCGGAGGGAGGAACGATTGGCCCAAGGTCCAGGAGAAAAAGTAGCTGCACCCAGTGCTCCTGCTGCTACAGCGTCACAGCCTGCCCAAGCACCAAAGAAAACCAAGAAGTGA 702 0.4872 MLKGASPSPSLISLASPTFAAKMVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREERLAQGPGEKVAAPSAPAATASQPAQAPKKTKK 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02407 233 Hamap 50S ribosomal protein L19e [rpl19e]. 25 171 IPR000196 GO:0003735|GO:0005840|GO:0006412
Phco2g02407 233 Gene3D - 24 78 IPR015972 GO:0003735|GO:0005840|GO:0006412
Phco2g02407 233 FunFam Ribosomal protein L19 79 216 - -
Phco2g02407 233 MobiDBLite consensus disorder prediction 171 206 - -
Phco2g02407 233 MobiDBLite consensus disorder prediction 171 233 - -
Phco2g02407 233 SUPERFAMILY Ribosomal protein L19 (L19e) 25 166 IPR035970 GO:0003735|GO:0005840|GO:0006412
Phco2g02407 233 MobiDBLite consensus disorder prediction 79 101 - -
Phco2g02407 233 SMART Ribosomal_L19e_2 25 168 IPR000196 GO:0003735|GO:0005840|GO:0006412
Phco2g02407 233 Pfam Ribosomal protein L19e 26 167 IPR000196 GO:0003735|GO:0005840|GO:0006412
Phco2g02407 233 FunFam Ribosomal protein L19 23 78 - -
Phco2g02407 233 Gene3D - 79 212 - -
Phco2g02407 233 ProSitePatterns Ribosomal protein L19e signature. 29 48 IPR023638 -
Phco2g02407 233 CDD Ribosomal_L19e_E 26 189 IPR033935 GO:0003735|GO:0022625
Phco2g02407 233 MobiDBLite consensus disorder prediction 79 107 - -
Phco2g02407 233 MobiDBLite consensus disorder prediction 219 233 - -
Phco2g02407 233 PANTHER 60S RIBOSOMAL PROTEIN L19 23 210 IPR039547 GO:0003723|GO:0003735|GO:0022625
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02407 Phco-Chr2 54271768 54274864 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02407 2 54271768 54274864 Phco2g02407 2 54271768 54274864 ECH