Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02402 ATGGCTAAGCAACCACCAAAACCAACGCTTGGTCGGCTTCCCAGTATCAGAGACCGAGTCCAAGACACTCTCTCAGCTCATCGTAACGAACTCATTTCTCTTCTCTCCAGGTATGCGGCTCAGGGGAAAGGGATTTTGCAACCTCATAACTTAATTGATGAACTTGACAACATCCCTGGTGACGAACAAGCAAAGTTGGACCTTAAAAATGGTCCCTTTGGTGAGATTGTCAGGGCTGCACAGGAAGCCATAGTTTTGCCTCCTTTTGTGGCAATAGGAGTTCGTCCAAGACCTGGTGTTTGGGAATATGTCCGTGTTAATGTCTCTGAACTCAGCGTGGAGCAATTAAGCGTTTCTGAATATCTCAGCTTTAAGGAAGAACTCGTGGATGGGAAGACTAATGACAATTTTGTACTGGAACTTGATTTTGAGCCATTTAATGCCTCATTTCCTCGTCCATCCCGTTCATCATCTATTGGCAATGGTGTCCAATTTCTCAATCGCCACCTTTCATCAAGTATGTTCCGCAACAAAGATTCCTTGGAGCCCTTGCTTGATTTCCTCCGAGCTCACAAATATAAGGGCCATGCTCTGATGTTAAATGATAGAATACATAACATTTCCAAACTTCAGGCTGCTCTAGCCAAGACTGAGGATTATCTTTCTAAGATTCCACGTGATACACCCTATTCAGATTTTGAATATGTGTTACAAGGAATGGGTTTTGAGAGAGGTTGGGGTGATACTGCTCAAAGGGTATTGGAAACGATGCATCTGCTACTGGATATTCTTCAGGCTCCTGATCCTTCCACACTTGAGACTTTTCTTGGCAGAGTGCCAATGGTATTCAATGTTGTTATATTATCTCCTCATGGCTTCTTTGGACAAGCCAATGTCTTGGGTTTGCCAGACACTGGTGGGCAGGTTGTTTATATACTAGATCAAGTGCGTGCCCTTGAGAATGAGATGCTCCTTCGGATTAAGAAACAAGGACTAGATTTCACTCCTAGAATTCTAATTGTTACCAGGCTAATACCTGATGCAAAGGGGACAACTTGCAATCAACGACTAGAAAGAGTCAGTGGTACTGACCACACTCATATTTTGCGAGTTCCATTCAGATCAGACTCAGGAACTCTCCGTAAATGGATTTCAAGGTTTGATGTGTGGCCTTATCTAGAGACTTATGCAGAGGATGTTGCCAGTGAAATTGCTGCTGAGTTACAAGGTCATCCTGACTTCATCATTGGAAACTACAGTGATGGGAATCTTGTTGCATCTTTATTGGCTTATAAGATGGGAGTTACACAGTGCACCATCGCGCATGCACTTGAGAAGACAAAATATCCGGATTCAGATTTATATTGGAAGAAATTTGATGATAAATATCACTTTTCATGCCAGTTCACTGCTGATCTAATAGCCATGAATAATGCTGATTTTATCATCACCAGTACTTACCAAGAGATTGCAGGAACGAAAAATACCGTTGGACAGTATGAGAGCCACACTGGTTTTACTCTTCCTGGGTTGTATAGGGTTGTCCATGGCATTGATGTTTTTGATCCCAAGTTCAATATTGTTTCTCCTGGAGCAGATATGTCAATGTATTTCCCCTACTCTGAAAAGCAGAAGAGGCTTACATCCCTACATGGTTCAATTGAACAGCTATTGTATGATCCAGCACAGACTGATGAATACATTGGATCATTGAATGACAAGTCAAAGCCCATAATTTTCTCCATGGCAAGGCTAGACAGAGTGAAGAACATAACAGGATTGGTTGAATGCTTTGCTAAGAACAGCAAATTGAGGGAATTGGTCAACCTTGTTATAGTAGCTGGTTACATTGATGTAAAGAAGTCCAGCGACAGAGAAGAAATTGCAGAAATTGAGAAGATGCATGGTCTCATGAAAGAGTACAAATTAAATGGTGATTTTCGTTGGATTGCTGCCCAAACAAATAGGGCACGTAATGGGGAGTTGTATCGCTACATAGCAGACACACAAGGTGCTTTCGTTCAGCCTGCTTTCTATGAAGCTTTCGGGCTTACAGTTGTGGAGGCCATGACCTGTGGACTTCCCACATTTGCTACTTCCAATGGTGGTCCTGCTGAGATCATTGAGCATGGTATATCAGGATTTCACATTGATCCTTATCACCCTGATCAAGCTTCGGAGTTATTGGTTGAATTCTTCCAGAAATGCAAGAAGGACCCAAGCCATTGGAAGAAAATATCTGAAGGTGGTCTTCAAAGAATTTATGAAAGGTACACTTGGAAGATTTATTCCGAAAGGCTCATGACTTTGGCGGGAGTTTACAGTTTCTGGAAATACGTTTCCAAATTAGAGAGGCGTGAAACTCGACGATATATTGAGATGTTCTATATCCTCAAGTTCCGCGATTTGGCAAAATCTGTCCCGCTAGCAAAGGATGATGCAAGTTAA 2448 0.422 MAKQPPKPTLGRLPSIRDRVQDTLSAHRNELISLLSRYAAQGKGILQPHNLIDELDNIPGDEQAKLDLKNGPFGEIVRAAQEAIVLPPFVAIGVRPRPGVWEYVRVNVSELSVEQLSVSEYLSFKEELVDGKTNDNFVLELDFEPFNASFPRPSRSSSIGNGVQFLNRHLSSSMFRNKDSLEPLLDFLRAHKYKGHALMLNDRIHNISKLQAALAKTEDYLSKIPRDTPYSDFEYVLQGMGFERGWGDTAQRVLETMHLLLDILQAPDPSTLETFLGRVPMVFNVVILSPHGFFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKKQGLDFTPRILIVTRLIPDAKGTTCNQRLERVSGTDHTHILRVPFRSDSGTLRKWISRFDVWPYLETYAEDVASEIAAELQGHPDFIIGNYSDGNLVASLLAYKMGVTQCTIAHALEKTKYPDSDLYWKKFDDKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTGFTLPGLYRVVHGIDVFDPKFNIVSPGADMSMYFPYSEKQKRLTSLHGSIEQLLYDPAQTDEYIGSLNDKSKPIIFSMARLDRVKNITGLVECFAKNSKLRELVNLVIVAGYIDVKKSSDREEIAEIEKMHGLMKEYKLNGDFRWIAAQTNRARNGELYRYIADTQGAFVQPAFYEAFGLTVVEAMTCGLPTFATSNGGPAEIIEHGISGFHIDPYHPDQASELLVEFFQKCKKDPSHWKKISEGGLQRIYERYTWKIYSERLMTLAGVYSFWKYVSKLERRETRRYIEMFYILKFRDLAKSVPLAKDDAS 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02402 815 FunFam Sucrose synthase 152 281 - -
Phco2g02402 815 Pfam Glycosyl transferases group 1 572 746 IPR001296 GO:0016757
Phco2g02402 815 Gene3D Glycogen Phosphorylase B; 286 803 - -
Phco2g02402 815 FunFam Sucrose synthase 286 571 - -
Phco2g02402 815 PANTHER - 12 812 IPR012820 GO:0005985|GO:0016157
Phco2g02402 815 Pfam Sucrose synthase 12 559 IPR000368 GO:0005985|GO:0016157
Phco2g02402 815 Gene3D - 29 151 - -
Phco2g02402 815 FunFam Sucrose synthase 15 151 - -
Phco2g02402 815 NCBIfam sucrose synthase 28 809 IPR012820 GO:0005985|GO:0016157
Phco2g02402 815 Gene3D - 152 281 - -
Phco2g02402 815 Gene3D Glycogen Phosphorylase B; 533 760 - -
Phco2g02402 815 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 301 769 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02402 Phco-Chr2 54224859 54230473 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02402 2 54224859 54230473 Phco2g02402 2 54224859 54230473 ECH