Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02385 ATGATGCTTTCCTCCAAACCACCGCGCCGGAAAATTGTTCCGGCCAACGGCGACGAGTCCGCAGATAAACTGGACCAGCTTCTCTTGTCCTCCGCCATATGCAACAACGAGGACATAGGCCCGTTCATCCGGAAGGCCTTCGCCTCCGGCAAGCCGGAGATGCTCCACCACCACCTCCGTCACTTTGCGCGCTCGAAGGAGTCCGAGATTGAGGAAGTGTGCAAGGCTCACTACCAGGAATTCATCCTCGCCGTCGACGATCTACGATCCCTCCTCTCAGACGTCGATTCGTTGAAGTCCTCCCTCTCCGACTCCAACTCGCGGCTCCAGTCTGTTGCGCGCCCGCTCCTGTCGTCGCTCGACGCCTTCGTCGAGACGCGGAACGTCTCGAAGAACGTGAACCTTGCCATCGACTCCATCCGCGCGTGCGTCAAGCTGATGGAGGTTTGCACGCGCGCCAATCGCCACCTCGCGGACGACAACTTCTACATGGCTCTTAAGTGCGTGGACACGATCGAGCGGGAGTATTTGGACAAAACGGCGTCGTCCACGCTGAAGCGGATGCTGGAGAAGAAGATTCCAGATATTCGGCTGTACATCGAGAGGAAGGTGAACAAGGAGTTCGGGGACTGGTTGGTTGAGATCCGAGTCGTGAGTCGTAATTTAGGTCAATTGGCGATAGGTCAAGCCTCGTCAGCGAGGCAGAGAGAAGAGGATCTTAGAATTAAGCAGCGGCAAGCGGAGGAACAGAGTAGACTCAGCGTGAGGGACTGTATTTACGCTTTGGAAGAAGAGGATGAAGATGGAATCATCGCTGGCGGGATCGGTGAAGACGGCGGTGGAGTCGCGGGGTTTGATTTGACTTCGTTGTACAGGGCATACCATATTCATCAGACTTTAGGGTTAGAGGATCGGTTTAAGCAGTATTATTTTGAGAACCGGAAGCTTCAGTTGACTTCGGACTTTCAGGTCTCGTCCATGACTCCTTTTCTGGAATCGCATCAAACGTTCTTTGCGCAGATTGCAGGGTTCTTTGTGGTGGAGGATCGCGTGTTGAGAACCGGAGGTGGGTTGATTTCAAAATTGGAGGTTGAGAATCTGTGGGAGATTGCTGTTAGTAAGATGTGTTCAGTACTGGAGGATCAGTTCTCCAGAATGCAAACTGCTAATCATCTTTTGCTTATTAAGGATTATGTGAGTCTGTTAGGAGTAACCCTGCGGAGATATGGGTACCCCATTGATGCGTTGCTTGATGTTTTGAGCAAACACAGGGATAAGTACCACGAACTGCTTTTGTCTGATTGTAGGAAGCAGATTGCGGAGGCGGTTGCGGCTGATAAATTTGAGCAGATGTTGATGAAAAAAGAGTATGAGTATTCCATGAATGTGCTTTCTTTCCAGATACAGACTACGGATATCATACCAGCTTTTCCCTATGTTGCCCCTTTTTCAACCACTGTGCCAGATTGTTGTCGGATTGTACGGTCATTCATTGAGGATTCTGTGAGTTTCATGTCCTATGGCGGGCAGCTTGAGTTCTATGAAGTTGTTAAGAAATATCTAGACAGGCTTTTGATTGAGGTTTTAGATGAAGCTTTAGTGAAGCTTATCAATACCTCGATTAGCGGTGTCTCCCAGGCAATGCAAATGGCAGCGAATATGGCTGTCTTGGAGCGTGCTTGTGATTTTTTCTTCCGCCATGCTGCACAGCTTTCGGGTGTTCCCTTGAGAATGGTGGAGAGAAGCAGAAGGCAGTTTCCCCTAAGAAAAGCTCGTGATGCTGCAGAAGAGATGCTCTCTGGGCTACTCAAAGCCAAAGTTGATGGATTTATGACCTTGATCGAGAATGTAAATTGGATGGGTGATGAGGCACCTCAGAGTGGAAATGAATATATAAATGAGGTTATAATTTATTTGGAAATTTTGGTTTCAACTGCTCAACAGATATTGCCATCTCAAGTCCTGAAGAGAGTATTGCAGGAAGTTTTTGCTCACATATCCGAGAAGATAGTTGGGACTTTAATCAGTGATTCTGTTAAAAGGTTTAATGTCAATGCTATTAATGGAATTGAAGTAGACATTCGGTTCTTAGAATCATTTGCTGATAATCAGGCCTCTCTTTTCTCTGATGGGGATGTTGATGTTTTGAAAGCATCACTTGCCAGTTCAAAGCAACTGATTAATTTGCTATTGAGTAATCATCCGGAGAACTTCTTGAATCCAGTGATAAGGGAGAGGAGTTACAACACTTTGGACCACAAGAAAGTGGTGATTGTTTCAGAAAAGTTGAGGGATCCTTCAGATCGGCTATTTGGAACCTTTGGTAGTCGTGGGGCCAGGCAGAATCCGAAAAGGAAATCATTGGATACGTTGATAAAAAGACTTAGGGATGTTAGCTGA 2400 0.4738 MMLSSKPPRRKIVPANGDESADKLDQLLLSSAICNNEDIGPFIRKAFASGKPEMLHHHLRHFARSKESEIEEVCKAHYQEFILAVDDLRSLLSDVDSLKSSLSDSNSRLQSVARPLLSSLDAFVETRNVSKNVNLAIDSIRACVKLMEVCTRANRHLADDNFYMALKCVDTIEREYLDKTASSTLKRMLEKKIPDIRLYIERKVNKEFGDWLVEIRVVSRNLGQLAIGQASSARQREEDLRIKQRQAEEQSRLSVRDCIYALEEEDEDGIIAGGIGEDGGGVAGFDLTSLYRAYHIHQTLGLEDRFKQYYFENRKLQLTSDFQVSSMTPFLESHQTFFAQIAGFFVVEDRVLRTGGGLISKLEVENLWEIAVSKMCSVLEDQFSRMQTANHLLLIKDYVSLLGVTLRRYGYPIDALLDVLSKHRDKYHELLLSDCRKQIAEAVAADKFEQMLMKKEYEYSMNVLSFQIQTTDIIPAFPYVAPFSTTVPDCCRIVRSFIEDSVSFMSYGGQLEFYEVVKKYLDRLLIEVLDEALVKLINTSISGVSQAMQMAANMAVLERACDFFFRHAAQLSGVPLRMVERSRRQFPLRKARDAAEEMLSGLLKAKVDGFMTLIENVNWMGDEAPQSGNEYINEVIIYLEILVSTAQQILPSQVLKRVLQEVFAHISEKIVGTLISDSVKRFNVNAINGIEVDIRFLESFADNQASLFSDGDVDVLKASLASSKQLINLLLSNHPENFLNPVIRERSYNTLDHKKVVIVSEKLRDPSDRLFGTFGSRGARQNPKRKSLDTLIKRLRDVS 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02385 799 Pfam Exocyst complex subunit Sec15-like 459 763 IPR046361 -
Phco2g02385 799 Gene3D - 413 585 IPR042045 -
Phco2g02385 799 PANTHER SEC15 16 797 IPR007225 GO:0006886|GO:0090522
Phco2g02385 799 Coils Coil 230 250 - -
Phco2g02385 799 Gene3D Dsl1p vesicle tethering complex, Tip20p subunit, domain D 591 738 IPR042044 -
Phco2g02385 799 PIRSF Sec15 3 799 IPR007225 GO:0006886|GO:0090522
Phco2g02385 799 FunFam Exocyst complex component 413 581 - -
Phco2g02385 799 FunFam Exocyst complex component 591 738 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02385 Phco-Chr2 54121896 54124295 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02385 2 54121896 54124295 Phco2g02385 2 54121896 54124295 ECH