Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02378 ATGGCTTCGGGCTTGGTTTTCCGAGGGCACGAGGCACAACCTGTGAACGACGCCTATTACCCGAAGCCGCAAAAGCCATGGTTTTTCCTCCACTACATCCTCCGCGAGCAGCGACTCCATTTCCTCTTCCTCGGCGTTATCCTCGCCTCCATCTTCTTCTTCCTCCTCCCCTCCTCCTCTTCTCCTCCCGTCCAGGCCCACGACCCATTCCCCGCTTCTTTCTTGGGCCGCGACGAGTTAACGCTCTGGCCCACTACCAACACCCGAAGCTATGACGTGGCGGTGCATTCCGTGGGGAAGATTCCCCTAGGGATTAAACGGAAGGGGCTCCGGGTTGTGGTGACGGGCGGGGCCGGGTTCGTCGGGTCCCACTTAGTGGATCGGTTGATTAGCCGAGGAGACAGCGTGATTGTGGTTGACAATTTCTTCACAGGAAGGAAAGAAAACGTGATGCACCATTTTCGGAATCCGAATTTCGAACTTCTCAGACACGACGTCGTTGAGCCTCTCCTCTTGGAAGTCGACCAGATCTACCATCTCGCTTGCCCTGCCTCCCCTGTCCATTACAAGTTCAATCCCACGAACGTGGTGGGCACGTTGAACATGCTGGGGCTGGCTAAAAGAATTGGCGCGAGGTTCTTGTTAACGAGTACCAGCGAGGTTTATGGAGATCCTCTGCAGCACCCTCAGAAGGAGACTTATTGGGGCAACGTCAATCCCATTGGTGTTCGAAGCTGCTACGACGAGGGAAAGCGTACGGCTGAAACGTTAGCCATGGATTACCACAGAGGAGCCGGTGTCGAGGTGAGAATAGCTAGGATTTTCAACACTTACGGGCCTCGAATGTGCTTAGACGATGGTCGCGTTGTTAGTAACTTCGTTGCTCAGGCACTAAGAAAGGAGGCTTTGACCGTTTATGGGGATGGGAAGCAAACTAGAAGTTTCCAATACGTTTCTGATTTGGTGGAGGGGCTGATGCGCCTTATGGAAGGAGAACACGTGGGACCTTTCAATCTTGGAAATCCTGGTGAATTCACCATGCTTGAACTTGCCAAGGTGGTACAAGAAACCATAGATCCAGAGGCTAAGATAGAGTACAGGCCGAACACAGAGGATGACCCACACAAGAGAAAGCCTGATATCACTAGGGCCAAGGAGCTACTAGGCTGGGAACCCAAGGTGGACCTACGCAAGGGACTCCCTCTAATGGTTTCTGACTTCAGACAACGCATTTTTGGGGACCAAAAGGAAGGAGCAACCTCTACCTAA 1269 0.5288 MASGLVFRGHEAQPVNDAYYPKPQKPWFFLHYILREQRLHFLFLGVILASIFFFLLPSSSSPPVQAHDPFPASFLGRDELTLWPTTNTRSYDVAVHSVGKIPLGIKRKGLRVVVTGGAGFVGSHLVDRLISRGDSVIVVDNFFTGRKENVMHHFRNPNFELLRHDVVEPLLLEVDQIYHLACPASPVHYKFNPTNVVGTLNMLGLAKRIGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQALRKEALTVYGDGKQTRSFQYVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAKVVQETIDPEAKIEYRPNTEDDPHKRKPDITRAKELLGWEPKVDLRKGLPLMVSDFRQRIFGDQKEGATST 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02378 422 MobiDBLite consensus disorder prediction 363 382 - -
Phco2g02378 422 FunFam UDP-glucuronic acid decarboxylase 2 106 226 - -
Phco2g02378 422 Gene3D - 227 412 - -
Phco2g02378 422 Gene3D - 106 226 - -
Phco2g02378 422 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 108 412 IPR036291 -
Phco2g02378 422 Pfam GDP-mannose 4,6 dehydratase 114 401 IPR016040 -
Phco2g02378 422 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 21 415 IPR044516 GO:0042732|GO:0048040|GO:0070403
Phco2g02378 422 FunFam UDP-glucuronic acid decarboxylase 1 227 412 - -
Phco2g02378 422 CDD UGD_SDR_e 111 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02378 Phco-Chr2 54072324 54078012 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02378 2 54072324 54078012 Phco2g02378 2 54072324 54078012 ECH