Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02372 ATGAAGTTCTGCAAAAAGTACCAGGAATACGTACAAGCCCAGGAGAAGAAGCTTCCAGGCGTAGAGTTCAAGACGCACAAGAAGATCTTGAAGAAGTGCAGGAAAAACCCTTCATCCCAGAAACCCCTTAATGCATCCCTTGCCGCCAAAACCAGCCCGGACAACTGCCCAGTGTGCGATGGAACTTTTTTCCCTTCCCTTCTCAATGAAATGTCAAATGTAGTGGGGTGTTTTAATCAGCGTGCGCAGAAATTGTTGGAGCTACATCTTGCTTCTGGCTTCAGAAAGTACTTTTTTTGGATCAAAGGCAGATTGCACGGAAACCATACTGCTCTTATTCAAGAAGGCAAAGATCTTGTCACGTACGCACTCATAAATGCCATGGCAATTCGAAAAATACTGAAGAAATATGATAAGATTCATTATTCCAAGCAAGGGCAATTATTCAAGTCGCAGGTACAGAGTATGCACAAGGAGATTCTTCAGAGTCCCTGGCTTTGTGAGCTTATGGCCTTCCACATCAATTTAAGGGAAACTAAGGTCAAGTCGAGGAAGGAACATACTTTGTTCGATGGATGTTCTCTCACAATTAAGGATGGGAAACCGTCACTTTCTTGTGAGCTCTTTGATTCTATCAAATTGGATGCTGACTTGACTTGTTCTATATGCTTGGACACACTGTTTGATCCAGTTTCTCTGACTTGTGGCCACATATTCTGCTATATTTGTGCTTGCTCGGCTGCATCAGTATCTATTGTTAACGGACTTAAGTCTGCAGATTCTAAAAAGAAATGTCCTCTATGCCGCGAGGGTGGTGTATATGAAGGTGCTGTGCACTTGGAAGAACTAAATATTCTGTTAGGCCGAAGCTGTCAGGAATACTGGGAGCAGAGGCTTCAGACCGAGAGGGTGGAGAGGATTAAGCAAATAAAGGAACACTGGGATTCACAGTGTAGGGCATTCGTAGGGGTCTAA 975 0.4369 MKFCKKYQEYVQAQEKKLPGVEFKTHKKILKKCRKNPSSQKPLNASLAAKTSPDNCPVCDGTFFPSLLNEMSNVVGCFNQRAQKLLELHLASGFRKYFFWIKGRLHGNHTALIQEGKDLVTYALINAMAIRKILKKYDKIHYSKQGQLFKSQVQSMHKEILQSPWLCELMAFHINLRETKVKSRKEHTLFDGCSLTIKDGKPSLSCELFDSIKLDADLTCSICLDTLFDPVSLTCGHIFCYICACSAASVSIVNGLKSADSKKKCPLCREGGVYEGAVHLEELNILLGRSCQEYWEQRLQTERVERIKQIKEHWDSQCRAFVGV 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02372 324 SUPERFAMILY RING/U-box 212 271 - -
Phco2g02372 324 CDD SPX_BAH1-like 2 147 - -
Phco2g02372 324 ProSitePatterns Zinc finger RING-type signature. 235 244 IPR017907 -
Phco2g02372 324 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 207 322 IPR013083 -
Phco2g02372 324 PANTHER E3 UBIQUITIN-PROTEIN LIGASE BAH1 1 323 IPR033326 -
Phco2g02372 324 ProSiteProfiles Zinc finger RING-type profile. 220 269 IPR001841 -
Phco2g02372 324 Pfam Zinc finger, C3HC4 type (RING finger) 217 270 - -
Phco2g02372 324 ProSiteProfiles SPX domain profile. 1 151 IPR004331 -
Phco2g02372 324 SMART ring_2 220 268 IPR001841 -
Phco2g02372 324 CDD RING-HC_BAH1-like 210 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02372 Phco-Chr2 54034832 54037515 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02372 2 54034832 54037515 Phco2g02372 2 54034832 54037515 ECH