Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02368 ATGGAGAGCAGTGAGGCCATGGATGTTGAGGAGCAACCTTCACCCAACCCCACCAACGTAAAACGCTTCGGCCTTAAAAACTCTATTCAAACCAACTTCGGCGACGACTATGTTTTCCAAATTGTCCCAAAGGATGATTGGAGTGCAATGGCGGTTTCACTGTCAACGAACGCAGTGAAACTATACTCACCTATGGCGGGTCAGTATTTCGGAGAGTTCAAGGGTCACACCGCAACCATCAATCAGATTTTATTTTCGGGTACTTCACATCACCAAGTTTTGTGTTCGTGTTCTTCTGATGGCACTGTGAGAGCTTGGGACACACGCACATTTCAGCAGGTTTCTTGCATCAATGCTGGTTCTTCGCAGGAGGTTTTCAGCTTCTGTCTTGGAGGAACTAGTGGGAATTTAGTTGCTGCCGGGTGTAAATCGCAGATACTGTTCTGGGATTGGAGAAATATGAAGCAAATTGCATGCCTGGAAGACTCCCATGTGGAAGATGTCACTCAGGTTCATTTTGTCCCCAACGAACAAGGAAAGCTTATTTCTGCTTCAGTAGATGGGTTGATCTGCACATTTGATACTACTGGAGATATCAATGATGATGATCATCTAGAATCAGTCATTAATATGGGGACTTCAATTGCAAAGGTGGGGATTTTTGGAGAGAGTTACCAGAAGCTTTGGTGTTTAACACATATTGAAACCCTGGGTATCTGGAACTGGAAAGATGGTAGAAATGAAGGAAACTTCTCAGATGCACGTACTTTAGCTTCTGAAAGTTGGAATTTGGATAATGTTGACTATTTCATTGATTGTCACTACTACAGAGAATCTGACAAACTATGGCTGATTGGTGGCACTAATGCTGGTACCATGGGCTACTTTCCTGTAAATTACAAAGGAGTGGCAACAATTGGAGCTGCAGAAGCAATTCTTGAAGGTGGGCACACTAGTGTTATTAGGAGTGTTTTACCCATGTCAAAAATTCATTCTAATAGTCCCACCCAAGACATTTTTGGATGGACTGGTGGGGAAGATGGTCGGCTATGTTGTTGGCTCTCTGATCATTCCTCTGAATCAAATCGATCTTGGATTTCAAGCACATTGATTACGAGGCCAGAAAAAACTCGCAAGAAAAATCGTCATCAACCCTACTAG 1161 0.4324 MESSEAMDVEEQPSPNPTNVKRFGLKNSIQTNFGDDYVFQIVPKDDWSAMAVSLSTNAVKLYSPMAGQYFGEFKGHTATINQILFSGTSHHQVLCSCSSDGTVRAWDTRTFQQVSCINAGSSQEVFSFCLGGTSGNLVAAGCKSQILFWDWRNMKQIACLEDSHVEDVTQVHFVPNEQGKLISASVDGLICTFDTTGDINDDDHLESVINMGTSIAKVGIFGESYQKLWCLTHIETLGIWNWKDGRNEGNFSDARTLASESWNLDNVDYFIDCHYYRESDKLWLIGGTNAGTMGYFPVNYKGVATIGAAEAILEGGHTSVIRSVLPMSKIHSNSPTQDIFGWTGGEDGRLCCWLSDHSSESNRSWISSTLITRPEKTRKKNRHQPY 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02368 386 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 73 110 - -
Phco2g02368 386 ProSitePatterns Trp-Asp (WD) repeats signature. 94 108 IPR019775 -
Phco2g02368 386 Gene3D - 124 377 IPR015943 GO:0005515
Phco2g02368 386 Pfam WD domain, G-beta repeat 68 107 IPR001680 GO:0005515
Phco2g02368 386 MobiDBLite consensus disorder prediction 1 22 - -
Phco2g02368 386 ProSiteProfiles Trp-Asp (WD) repeats profile. 73 116 IPR001680 GO:0005515
Phco2g02368 386 SUPERFAMILY WD40 repeat-like 38 353 IPR036322 GO:0005515
Phco2g02368 386 SMART WD40_4 66 107 IPR001680 GO:0005515
Phco2g02368 386 SMART WD40_4 153 194 IPR001680 GO:0005515
Phco2g02368 386 SMART WD40_4 110 150 IPR001680 GO:0005515
Phco2g02368 386 Gene3D - 41 123 IPR015943 GO:0005515
Phco2g02368 386 PANTHER UNCHARACTERIZED 19 386 IPR039328 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02368 2 53978906 53982578 Phco2g02368 2 53978906 53982578 ECH