Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02348 ATGGATGCGTGGAACGAAGATTTTGTGGAGCAGGAGATTGGAAGCTCCGCGGAATCGTTCCAGAAGTTTTTACTTTCGCAGAGAGATCTCTTCCACAGCCAGATCGATCAGTTTCAGGAAATCGTCGTCACGCAATGCAAACTCACAGGCGTCAATCCTCTCTCTCAAGAAATGGCAGCTGGTGCTTTGTCAATAAAAATTGGAAAAAGACCTAGGGATTTATTGAATCCAAAGGCTGTAAATTACATGCAATCAATTTTTTCGATTAAAGATTCTATTAGCAAAAAAGAGTTGCGCGAGATCAGTGCTTTATTTGGTGTCACAGCCACGCAGGTGCGTGACTTTTTCACCGGTCAGCGCTCAAGAGTGAGGAGACTAGTGCAGTTTTCAAAGGAGAGGGCACTAGGATCTACTTCTTGTGAAGATCCTCACGATGATAAAATAATTTCTGATCCTGTGAGACTAAATAATCCAGCTTCCCTAAACTCTACTGTCCCATCCAATGCTGAAGAAGCATCTTGTTCAACACAGGATGCAGCCTTGTCTGACCTAGATGACTCAGATAAACATTTTGTTGATAATATTTTTAGTTTAATGCAAAAAGAAGAGACATTTTCCGGGCAAGAGAAATTGATGGAGTGGATATTGACAATACAGAATTCTTCAGTATTGTTGTGGTTTTTGAACAGAGAAGGTGGAATAACTTTAGCTACTTGGTTGAGTAAGGCAACTGTTGAGGAGCAAACCAGTGTCCTTCTTCTTATCTTGAAGGTTCTTTGTCATTTGCCTTTACATAAAGCCATTCCCATGCACATATCAGCTATATTGCAGAGTGTAAATAAACTACGGTTCTACAGGGCATCAGACATATCAAACAGGGCAAGGATTTTGTTGTCAAAGTGGAGCAAATTATTAGCGAGGAACCAAGTAATAAAGAAGCCCAATGGTGTCAGGCCTTCTAGTGATGGTCATAAAGAGTTTATATCTCAGAGTATTGGTCAATTTGTGGGCTCTGAATCATGGCATTCAAATATTGATGTTCCTGAAGACTTTTTCTCACTCTCAAGCGAATGTCTGGACAATTTCAGGAAAGTGGGATCTTCACAAGCTGCAAAATTGTTGACTCCTAGCTTGGATGATTCTAGTAAAAAGTCCACACTTGGTGTATTGTCATCTCAATCTAGAGAGCGCAGAAAAATTCAATTGGTGGAACAGCCGGGCCAAAAGTCAGTTAGCAGAAGCTCACAGGTGACGAGAGCAGGGCCTGTAAGTCAAGGTCGTCCCATGTCTGCTGATGATATCCAAAAAGCAAAAATGCGTGCTTTATTTATGCAGAGTAAGTATGGGAAATCCAGTTCAAAAGAAAGTAAAGAAACAAAGATTGATAGTCAGAATAAACAGCCACAGACAATTCCTGCCAGTATTGCAGCTTGCTCTTCTAAAGTTCCTACTCCTTACAAAATTGATGAAAACAAGAAACCTTTGTTACTTGCCTCTAAAACCAGCAATAGGCTGGAAGCTTATACAAAACCGAAAATGGATGTGAAGGAACCTCTCTGGGAGAAGTGCATGAGGGTTCAGATCCCATGGAAAAGACCAGCAGAAGTGGAACTTAAAGATTCCTGGAGAGTAGGTGCCGGTGAAAATAGCAAAGAGGTTGATGCCCAGAGAAACAGAGACCGCAGGGAAAAAGAAACTATATATAAAACTATCCAAGAAATCCCACCTAACCCAAAGGAGCCTTGGGACCTTGAAATGGACTATGATGACACTTTGACGTTGGAAATTCCTATTGAACAGTTACCAGATGGTGATGGTGCAGACATAACAGTTTCCCCCAAACAGGTTGCAGCTCATACTGCTCAAGGGGTGGCGTCCACTTCTTCGACAAGTATGGCTCCTGCTGAGCCTGATTTAGAATTGCTTGCCGTACTGCTAAAAAATCCAGAGTTGGTATTTGCCTTAACTTCTGGACAAGCCGGTAGCATACCCAGTGAAGAAATAGTGAAGCTGCTTGACATGATCAAGAGAGGAGGTGCGAACTTGGGTTTAAGTGAAAATACAAATGGGAGTTATGGCTCGAGTGTAAAAGCCCCGGAGAAGGTGGAAGTTTCTCTCCCATCACCAACCCCTTTAAGCGATCCAAGAACGAATGGATGGAGCTCTGAAGCATCGAAAAACCCCTTTTCACGGCGAAGTGTAGCATCTGATAGAATTATCCAGAACCATGCTGCAGTGGCAACTAGCAACTTATTAACTCAGATTCCCGTGACTAGCACCACTACAGTAAGGCAACAGCCAACAGTAGTTTCATCTTCGAGGCATCTCACAAGCACCGCAGTTTCTCCATATTCACTGCATCAGGCAACTAATGTTAATCCTGAAAAGCAACAACCAGTGGGGCATGTACAAATACCACCCTCAAATGTAGGTTTAACCATGAAGAAGAACTTAATCACTACCAATGCATCTTCAGTTAACTTTTCTGGCACTCATTCAACTGTATCAATGCGGGGTAATGGCACCAATTATGGTAATGACACCAATTATGTAAAACCCGTACATAATTTGAGTGTACAACATGAGGGTTTGTCTAATTCCTTCCCACAACCATCCTTCAAGTTACCCTCACCAACGCCATCAAATTCAGCCTCACATCAGCAACATGTGGTCCAGGAAGCCCATTACACTGAACCTCCTTATCGTAACCCTAGTCGTTCCTACCCACCACAAACCGAAAAATCAGACCATGGGTCTGAAAGCATGTGGAGAGTTAGGCAAGATGTGTCACCCAGTTATCATTCTCAAAGAAATCATAACAACTATAACGCAATGGCTGGGGGATCCAGGCAATCTGGTGTTTGGGAAAGAAATAATCACGGAAGGGAAGATTTTGAATCATGGAGTCCTGAAAATAGTCCAACTAGAAATACTAGGTATATACCAGGTAGAAACTACCCAGAGTCCAGAGTGAATCATGGAAGAAATCATAGACCTGAATGGTCAAGGCAGAGGGGTTCTTCTGGACACTGGGACCCTGGCAGGCAGGTAAATAGAAAGTGGCATGATCAGAGGCGATAA 3081 0.4262 MDAWNEDFVEQEIGSSAESFQKFLLSQRDLFHSQIDQFQEIVVTQCKLTGVNPLSQEMAAGALSIKIGKRPRDLLNPKAVNYMQSIFSIKDSISKKELREISALFGVTATQVRDFFTGQRSRVRRLVQFSKERALGSTSCEDPHDDKIISDPVRLNNPASLNSTVPSNAEEASCSTQDAALSDLDDSDKHFVDNIFSLMQKEETFSGQEKLMEWILTIQNSSVLLWFLNREGGITLATWLSKATVEEQTSVLLLILKVLCHLPLHKAIPMHISAILQSVNKLRFYRASDISNRARILLSKWSKLLARNQVIKKPNGVRPSSDGHKEFISQSIGQFVGSESWHSNIDVPEDFFSLSSECLDNFRKVGSSQAAKLLTPSLDDSSKKSTLGVLSSQSRERRKIQLVEQPGQKSVSRSSQVTRAGPVSQGRPMSADDIQKAKMRALFMQSKYGKSSSKESKETKIDSQNKQPQTIPASIAACSSKVPTPYKIDENKKPLLLASKTSNRLEAYTKPKMDVKEPLWEKCMRVQIPWKRPAEVELKDSWRVGAGENSKEVDAQRNRDRREKETIYKTIQEIPPNPKEPWDLEMDYDDTLTLEIPIEQLPDGDGADITVSPKQVAAHTAQGVASTSSTSMAPAEPDLELLAVLLKNPELVFALTSGQAGSIPSEEIVKLLDMIKRGGANLGLSENTNGSYGSSVKAPEKVEVSLPSPTPLSDPRTNGWSSEASKNPFSRRSVASDRIIQNHAAVATSNLLTQIPVTSTTTVRQQPTVVSSSRHLTSTAVSPYSLHQATNVNPEKQQPVGHVQIPPSNVGLTMKKNLITTNASSVNFSGTHSTVSMRGNGTNYGNDTNYVKPVHNLSVQHEGLSNSFPQPSFKLPSPTPSNSASHQQHVVQEAHYTEPPYRNPSRSYPPQTEKSDHGSESMWRVRQDVSPSYHSQRNHNNYNAMAGGSRQSGVWERNNHGREDFESWSPENSPTRNTRYIPGRNYPESRVNHGRNHRPEWSRQRGSSGHWDPGRQVNRKWHDQRR 1026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02348 1026 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 106 1010 - -
Phco2g02348 1026 Gene3D - 66 127 - -
Phco2g02348 1026 MobiDBLite consensus disorder prediction 862 1026 - -
Phco2g02348 1026 MobiDBLite consensus disorder prediction 377 431 - -
Phco2g02348 1026 MobiDBLite consensus disorder prediction 446 471 - -
Phco2g02348 1026 MobiDBLite consensus disorder prediction 862 892 - -
Phco2g02348 1026 MobiDBLite consensus disorder prediction 990 1005 - -
Phco2g02348 1026 MobiDBLite consensus disorder prediction 377 396 - -
Phco2g02348 1026 ProSiteProfiles 'Homeobox' domain profile. 66 126 IPR001356 GO:0003677
Phco2g02348 1026 SUPERFAMILY Homeodomain-like 69 130 IPR009057 -
Phco2g02348 1026 MobiDBLite consensus disorder prediction 710 728 - -
Phco2g02348 1026 MobiDBLite consensus disorder prediction 405 423 - -
Phco2g02348 1026 SMART HOX_1 68 130 IPR001356 GO:0003677
Phco2g02348 1026 MobiDBLite consensus disorder prediction 925 955 - -
Phco2g02348 1026 MobiDBLite consensus disorder prediction 683 728 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02348 Phco-Chr2 53884247 53892190 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02348 2 53884247 53892190 Phco2g02348 2 53884247 53892190 ECH