Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02339 ATGGGAGTGGTAACAGTTGGAGAATTGAAGCCTAGCATTTCAGGAAAAAGGACCTTTCGTCCAAGCTCAAGCATAAGACATGCCACCGAATGGCCAATATCTGACGTATCAAGTGATCTCACCATCGAGGCAGGAGCATCAGCTTTCGCACTTCACAAGTTTCCTCTCGTTTCTCGGAGTGGAAGAATTCGGAAGCTGCTGCTAGAAGCAAAAGATTCAAAAGTTTTACGCATAAGTCTCCCAAATGTGCCAGGTGGAGCAGAGGCATTTGAGCTAGCTGCCAAATTTTGCTATGGAGTCAATGTTGAGTTCACTCTCTCAAATGTTGCCTTGCTACGTTGCACGGCTCATTTTCTTGAAATGACCGAAGAATTTGCAGAAAAAAACTTAGAATCCAGAGTTGAAGCATACCTAAGGGACACAGTGCTCCCTGACATATCAAGCACAGTATATGTTCTTCACAGTTGTGAGACTCTTCTTCCAATGTCAGAGGAAATAAACCTGGTCAATAAGCTAATCAATGCAATTGCAAACAACGCGTGCAAAGAGCAGCTTACATCTGGTTTACTAAAACTTGATCACACTTTCCCTTCCAAAACCACACCTACCATGGAGCCAGAAACACCCTCAGATTGGTGGGGGAAGTCTTTCAATGTTCTTAGTCTTGAGTTCTTCCAACGAGTTGTATCCGTTGTTAAGTCAAAGGGACTAAAACAGGACATGATCAGCAAGATATTGATGAACTATGCACATGGTTCTCTTCAGGGGATTGGTGTTAGAGACCCCCAAGTGGTGAAAGGAAGTGTTCATGAAATGGAATTGCAAAAGAAACAAAGAGTCGTGGTTGAAACCATAGTTGGCTTACTCCCAACTCACTCAAGGAAAAGCCCTGTTCCAATGGGATTCCTCTCAAGTTTGTTGAAAGCTGCAATAGCAGCACCTGCATCAACTCCTTGCAAATCTGATTTAGAGAGGCGAATTAGTCTTCAACTTGACCAGGCAATTCTTGAAGACATCTTGATCCCAACAAACTCACCTCAAAACACCCACAACACGATGTATGACACTGACTCAATTCTGAGGATCTTTTCTATTTATCTAAACATGGACGAGGAGGATGGAGAAGATAGTGATAACTACATTGATGAAAGCCAAATGTATGATTTTGACAGTCCTGGATCTCCAAAACAAAGCTCAATCACAAAGGTATCGAAATTGCTGGACAGTTATCTCGCTGAAGTAGCTCTAGACGCAAACCTGCTGCCTTCAAAATTCACAGCACTTGCAGAACTACTTCCAGATCATGCACGTGTTGCAAGTGATGGACTCTATAGAGCTGTTGACATCTTCCTTAAGGTTCATCCAAACATGAAGGACTCAGAGAGGTACCGGCTATGCAAAACCATTGATTGTCAGAAACTGTCTCAAGAAGCATGCAGCCATGCAGCACAGAATGAAAGGCTACCAGTGCAGATGGTGGTGCAGGTGCTTTACTTCGAGCAAATGAGGCTTCGAAACGCCATGAATGGAGGGCACAACCAATTGTTCTTTGGACAGTTTCCTCAGCGTTCAGGAAGCGGTGCAGGGAGTGGAGCAATTTCCCCGAGAGATAACTATGCATCAGTGAGAAGAGAGAACAGAGAACTGAAGCTTGAAGTAGCAAGAATGAGAATGAGGCTGACTGACTTGGAGAAAGACCATGTGTGTATGAAGCAGGAGCTTGTTAAGTCTCACCCTGCCAACAAGTTGTTCAAATCATTCACCAGAAAGCTGAGTAAGCTGAATGCTCTATTCAGGATAAATAGCATTAAGCCAATTGGTGGGAAGGCTAGTTCAGAAACTCGCTTCCCTTTTCCAAAGAGAAGACGCCACTCCGTTTCATAA 1884 0.4374 MGVVTVGELKPSISGKRTFRPSSSIRHATEWPISDVSSDLTIEAGASAFALHKFPLVSRSGRIRKLLLEAKDSKVLRISLPNVPGGAEAFELAAKFCYGVNVEFTLSNVALLRCTAHFLEMTEEFAEKNLESRVEAYLRDTVLPDISSTVYVLHSCETLLPMSEEINLVNKLINAIANNACKEQLTSGLLKLDHTFPSKTTPTMEPETPSDWWGKSFNVLSLEFFQRVVSVVKSKGLKQDMISKILMNYAHGSLQGIGVRDPQVVKGSVHEMELQKKQRVVVETIVGLLPTHSRKSPVPMGFLSSLLKAAIAAPASTPCKSDLERRISLQLDQAILEDILIPTNSPQNTHNTMYDTDSILRIFSIYLNMDEEDGEDSDNYIDESQMYDFDSPGSPKQSSITKVSKLLDSYLAEVALDANLLPSKFTALAELLPDHARVASDGLYRAVDIFLKVHPNMKDSERYRLCKTIDCQKLSQEACSHAAQNERLPVQMVVQVLYFEQMRLRNAMNGGHNQLFFGQFPQRSGSGAGSGAISPRDNYASVRRENRELKLEVARMRMRLTDLEKDHVCMKQELVKSHPANKLFKSFTRKLSKLNALFRINSIKPIGGKASSETRFPFPKRRRHSVS 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02339 627 PANTHER OS12G0117600 PROTEIN 34 581 IPR043454 -
Phco2g02339 627 Coils Coil 539 566 - -
Phco2g02339 627 Pfam NPH3 family 211 479 IPR027356 -
Phco2g02339 627 SUPERFAMILY POZ domain 22 123 IPR011333 -
Phco2g02339 627 ProSiteProfiles NPH3 domain profile. 211 503 IPR027356 -
Phco2g02339 627 FunFam BTB/POZ domain-containing protein At1g03010 16 134 - -
Phco2g02339 627 Gene3D Potassium Channel Kv1.1; Chain A 26 142 IPR011333 -
Phco2g02339 627 Pfam BTB/POZ domain 37 123 IPR000210 GO:0005515
Phco2g02339 627 ProSiteProfiles BTB domain profile. 38 106 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02339 Phco-Chr2 53814706 53818245 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02339 2 53814706 53818245 Phco2g02339 2 53814706 53818245 ECH
Phco2g02339 2 53814706 53818245 Phco6g00862 6 8403216 8407275 PCT