Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02330 ATGAGCAGCCAGTCCAAGACCAACGTGGATGGAGTGCACAGTGATGTCAAGGTGGTGGAGAGCCCAACTAAAGAAAGACCCTACGATCTCTTGCTGCGCTTTCTCGGCCTCTCACTCACTCTTGTTGCAACCATCGTTGTTGCTGTCGACAATGAGACCAAACTCATCTCCTACGCTGAGATGCAATTCAAAGCCACTGCTAAGTGGGAATATTTGTCTGCTATGGTGTTTTTCGTGGTGTCAAACGCAATAGCATGCTCATATGCAGCTGCATCATTGGTGATAACAGTGATGGCAAGAAACAGTGGAACAAGAAAAAGCGATGTGACTCATTTGGTGGTAACCGCTTTAGACCTTGCGTTGATGGCACTGTTGTTCTCAGCCAATGGTGCAGCTTGTGCAGTGGGAGTGATAGCAGAGAAGGGTAACACGCACGTGCAATGGATGAAAGTGTGCGACGTCTTTGACGCCTATTGCCGCCACATCACAGCTGCATTGGTCCTCTCCATTATTGGCTCCACGGTGTTTCTCTTGCTGGTGCTGCATTCTGTTCTCAAACTCCATTACAGATCAAGAAGCTAG 582 0.4845 MSSQSKTNVDGVHSDVKVVESPTKERPYDLLLRFLGLSLTLVATIVVAVDNETKLISYAEMQFKATAKWEYLSAMVFFVVSNAIACSYAAASLVITVMARNSGTRKSDVTHLVVTALDLALMALLFSANGAACAVGVIAEKGNTHVQWMKVCDVFDAYCRHITAALVLSIIGSTVFLLLVLHSVLKLHYRSRS 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02330 193 PANTHER CASP-LIKE PROTEIN 1U1 21 188 IPR044173 -
Phco2g02330 193 Pfam Casparian strip membrane protein domain 26 173 IPR006702 -
Phco2g02330 193 NCBIfam plant integral membrane protein TIGR01569 30 186 IPR006459 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02330 Phco-Chr2 53758666 53759765 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02330 2 53758666 53759765 Phco2g02330 2 53758666 53759765 ECH