Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02322 ATGCAGAAAGAGAAGGTGATAATAGTCGGAGCCGGAACTTCTGGCATGGCCACCGCCGCATGCTTAACAAAGCAATCAATACCTTACATCATTCTCGAAAGAGAAGATTGTTTGGCTTCCTTGTGGCAAAAGTACACGTACGATCGTCTCCATCTCCATTTGGGGAAGAAAGTGTGCGAGTTGCCGTTCTTTCCGTTTCCCAAGTCTTACCCTAACTACGTGCCTCGGAAGCTGTTCTTAGAATACTTGGAAAGCTACGAGAAGCACTTTGACATGAAGATTTTGTACCAGCATTGCGTGGTGCTGGCGGAGTATGACGAAGGGGAAGAGTTGTGGAGAGTGAAGGCTGAGAACAGAAGTACTGGTGAGGTGGAGGAGTACGGTGGAAGGTTCTTGGTGGTGGCGAGTGGCGAAGATAAGCCTCACGTGCCTAGGGTTGAAGGGTTGGAGAGTTTCAGAGGAAAAGTGATTCATTCAACTTTGTACAAAAACGGGAAGGAGTACAGAGATGAACATGTTCTGGTTGTTGGATCTGGGAATTCTGGCATGGAGATTGCGCTTGATTTGGCCAATTTTGGTGCCAAACCTTCCATCATTGCTCGCACTCCGGTTCATTTTCTTTCAAGGGATATGATGTATTATGGATCGCTTTTGATGAAGTATTTGTCGCCAAAAGTAGTAGAGAATCTGTTGGTGATAGTTAGCAAGATTGTGTATGGTGATCTGAGTAAGTATGGGCTACCGTTTCCCAGTGAGGGTCCTTTCACATCGAAGCGAAAGTACGGTAAGTTCCCAGTCATTGATGTGGGAACAATCAAGAAAATCAAATCTGGAGAGATACAGGTGTTGCCCATAGAAATAGAGATTATAAGAGGCAACGAAGTGTTGTTCCGAGATGGCAAATCTCTCCCGTTTGATTCCATTATTTTCTGCACGGGCTTCAAGAGAACAACTCAAAAGTGGCTCAAGGGAGGTGATGATCTTCTAAACAAGGATGGTTTTCCTAGTTTGCCTAATCAATGGAAAGGTAAGAACGGTTTGTATTGCGTTGGAATGGCAAGAAGAGGATTCTTTGGAGCTAATCTTGAGGCTCAAAACGTAGCAAATGATATTGCCTCCATAATTCCGTAA 1131 0.4465 MQKEKVIIVGAGTSGMATAACLTKQSIPYIILEREDCLASLWQKYTYDRLHLHLGKKVCELPFFPFPKSYPNYVPRKLFLEYLESYEKHFDMKILYQHCVVLAEYDEGEELWRVKAENRSTGEVEEYGGRFLVVASGEDKPHVPRVEGLESFRGKVIHSTLYKNGKEYRDEHVLVVGSGNSGMEIALDLANFGAKPSIIARTPVHFLSRDMMYYGSLLMKYLSPKVVENLLVIVSKIVYGDLSKYGLPFPSEGPFTSKRKYGKFPVIDVGTIKKIKSGEIQVLPIEIEIIRGNEVLFRDGKSLPFDSIIFCTGFKRTTQKWLKGGDDLLNKDGFPSLPNQWKGKNGLYCVGMARRGFFGANLEAQNVANDIASIIP 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02322 376 PRINTS FAD-dependent pyridine nucleotide reductase signature 129 147 - -
Phco2g02322 376 PRINTS FAD-dependent pyridine nucleotide reductase signature 172 190 - -
Phco2g02322 376 PRINTS FAD-dependent pyridine nucleotide reductase signature 6 25 - -
Phco2g02322 376 Gene3D - 1 375 IPR036188 -
Phco2g02322 376 PRINTS Pyridine nucleotide disulphide reductase class-II signature 168 192 - -
Phco2g02322 376 PRINTS Pyridine nucleotide disulphide reductase class-II signature 5 27 - -
Phco2g02322 376 PIRSF FMO 1 322 IPR000960 GO:0050660|GO:0050661
Phco2g02322 376 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Phco2g02322 376 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 4 373 - -
Phco2g02322 376 Pfam Flavin-binding monooxygenase-like 4 315 IPR020946 GO:0004499|GO:0050660|GO:0050661
Phco2g02322 376 SUPERFAMILY FAD/NAD(P)-binding domain 1 267 IPR036188 -
Phco2g02322 376 SUPERFAMILY FAD/NAD(P)-binding domain 169 373 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02322 Phco-Chr2 53716347 53718160 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02322 2 53716347 53718160 Phco2g02322 2 53716347 53718160 ECH