Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02321 ATGCAGGAGGAAGAGAAGGTTGAGAGAGTGATAGTGGTGGGAGCAGGCCCCTCAGGCCTTTCCGCCGCCGCATGTTTCACCAAGCACTCCATTCCGTACATAATCCTTGAGAGAGAAGACTGTTTCGCTTCTCTTTGGAAGAAATACTCCTACGACCGTCTCCACCTCCATCTCAGCAAGCACTTCTGCCAGCTTCCCCACAAACCATTTCCACCCTCTTTCCCTCAGCACGTTCCCAAGAACCAGTTCCTCCAGTACCTCGACGACTACGTCTCCCACTTCGCCATCGCGCCGCTCTATCAGAGGACGGTGGAGCTGGCCCAGTACGACGACGCCCGCCGCTGCTGGAAGGTGGAGGCCCGGAATGGGGACTCCGGCGAGGTGGAGAAGTACTGCGGGAGATTCCTGGTGGTGGCTACTGGGGAAACTAGCGACCCCTTTGTGCCGGAAGTGGAAGGGTTGAGTAGTTTCCCTGGGAAGGTGATTCATTCCACTAGGTTTTCGTCAGGGAAGGAGTTCAAAGACAAGCACGTTCTTGTTGTCGGGTCTGGGAATTCTGGCATGGAAATCGCTTTGGACCTTATCAACCATGGTGCCAAAACCTCCATTCTCGTTAGAAGCCCGGTTCATTTTGTATCAAGGGGAATGGTGAGTTTAGGGTTGTTTCTGCTGAAGTATTTGCCGTTGAGCAGCGTGGACTCGTTAATGGTGATGCTGAGCACCATGGTTTACGGTGATGTCACAAAATATGGAGTAAGAAGACCCAATGAGGGTCCCTTTTACATGAAGGTCAAGCATGGAAAGTATCCAGTTATTGACGTTGGAACCTATAAAAAGATAAAGACTCAAGAACTAAAGGTTTTGGCAGCAGAAATAGAAAGCGTAAGAGGCAAGGATGTCCTATTCAAGAGTGGGGAGTTACACACATTTGACTCCATTGTTTTCTGCACCGGCTTCAAGAGATCAACCACCAAGTGGCTCAAGGGAGATGATTACCTTCTGAATGATGATGGTCTTCCAAAGCCAAGTTACCCCATCCATTGGAAGGGACATAATGGTTTGTACTGTGTTGGGCTATCAAGAAGAGGCTTGTATGGAGCTGCTGCAGATGCTGAAAATATAGCAAATGATATAAGCTTCTTCATGCAACATCCCTGA 1158 0.4957 MQEEEKVERVIVVGAGPSGLSAAACFTKHSIPYIILEREDCFASLWKKYSYDRLHLHLSKHFCQLPHKPFPPSFPQHVPKNQFLQYLDDYVSHFAIAPLYQRTVELAQYDDARRCWKVEARNGDSGEVEKYCGRFLVVATGETSDPFVPEVEGLSSFPGKVIHSTRFSSGKEFKDKHVLVVGSGNSGMEIALDLINHGAKTSILVRSPVHFVSRGMVSLGLFLLKYLPLSSVDSLMVMLSTMVYGDVTKYGVRRPNEGPFYMKVKHGKYPVIDVGTYKKIKTQELKVLAAEIESVRGKDVLFKSGELHTFDSIVFCTGFKRSTTKWLKGDDYLLNDDGLPKPSYPIHWKGHNGLYCVGLSRRGLYGAAADAENIANDISFFMQHP 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02321 385 PRINTS Pyridine nucleotide disulphide reductase class-II signature 173 197 - -
Phco2g02321 385 PRINTS Pyridine nucleotide disulphide reductase class-II signature 9 31 - -
Phco2g02321 385 PRINTS FAD-dependent pyridine nucleotide reductase signature 177 195 - -
Phco2g02321 385 PRINTS FAD-dependent pyridine nucleotide reductase signature 10 29 - -
Phco2g02321 385 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 8 380 - -
Phco2g02321 385 SUPERFAMILY FAD/NAD(P)-binding domain 174 378 IPR036188 -
Phco2g02321 385 Pfam Pyridine nucleotide-disulphide oxidoreductase 11 208 - -
Phco2g02321 385 Gene3D - 8 384 IPR036188 -
Phco2g02321 385 SUPERFAMILY FAD/NAD(P)-binding domain 9 211 IPR036188 -
Phco2g02321 385 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Phco2g02321 385 PIRSF FMO 6 367 IPR000960 GO:0050660|GO:0050661
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02321 Phco-Chr2 53702131 53706446 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02321 2 53702131 53706446 Phco2g02321 2 53702131 53706446 ECH