Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02306 ATGATCTGCTTTGTATCATGTCACCTTTGTCATAGAAAAATTATGATAATGCCTTACTTATTTTCGCCCATATCTGGTTGGGAGATGAACAAAAATGGTGTGATTCCGTGGATGAAGCAGCAATGGCGGGGAATAGTGAAAGTGCGTTTGAAATGGGTGAAGAACCGAAGCCTCGACCACGTCATCGACAAGGAAACCGATCTCAAAGCGGCCTGCCTCCTGAAGGACGCCATTAACCGCTCCTCCACCGCCTTCCTCACGGCGAAATCCGTGGCAGACTGGCAGAAGCTTCTCGGCCTCACCGTCCCTGTCCTACGCTTCCTCCGCCGCTACCCCACCCTCTTCCACGAGTTCCCGCACCCGCGCTGGCCCTCCCTCTCCTGCTTCCGCCTCACCGATACTGCACTTTTCCTACACTCCCAGGAACTCGCCCTCCACCAAACTCACCAAAACGACGCCGTCAAACGCCTCTCCAAGCTTCTCATGATGACCCGCTCACGCGCCCTATCCCTGTATTCCCTCCAATCGCTCAAGTGGGACCTCGGCTTACCTGACTCCTTTGAGAAGACCCTTGTCCCCAACTTCCCTAACGACTTCCAATTCGTCAAGTCCCCCAACGGCGTCGTTTCGCTCAAACTAGTACGATGGCCTGAGGAATTCGCTGTTTCCACTCTGCAGGAGAGAAATGAGTGTGGGAGCCACTACCGGGAATTCAAGCGGGGACAATCGGCATTGGCTTTTCCGATGAGGTTTCCGAGGGGGTACGGCGCGCAGAAGAAGGTGAAGACGTGGATGGAGGAGTTTCAGAAGCTGCCTTATGTTTCTCCCTATGCTGATTCCTCCAAGATTGATCCCAACAGCGATTTGATGGAGAAGCGCGTGGTCGGGGTTCTGCACGAGCTTTTGAGTTTGACTCTCCACAAGAAAACCAAGAGGAACTACTTGAGGAGCTTGAGGGAAGAGTTGAATCTTCCGCACAAGTTTACCCGGATTTTCACCAGGTATCCCGGCATTTTTTACCTCTCCTTGAAGTGTAAAACGACCACTATTACTCTCAGGGAAGGGTACCAGAGTGGGAAACTGGTTGACCCGCACCCTCTTGTTCGACATAGAGATAAGTTCTACCGTGTCATGCAGACGGGGCTTCTCTATCGTGGGGATGGGTCATTGAAACACGAGGAAAACAGTTCTTTGGTCCAGAATGATGAGCTAAGAAGTGAGGAATCTGAGGAGGCAGAGGTTGAAACGAGTGATGAACTCTGTGAGGGTGAATCGAGTGATGAACTCTGCGAGGGTGAAGCGAGTGAATAA 1311 0.5202 MICFVSCHLCHRKIMIMPYLFSPISGWEMNKNGVIPWMKQQWRGIVKVRLKWVKNRSLDHVIDKETDLKAACLLKDAINRSSTAFLTAKSVADWQKLLGLTVPVLRFLRRYPTLFHEFPHPRWPSLSCFRLTDTALFLHSQELALHQTHQNDAVKRLSKLLMMTRSRALSLYSLQSLKWDLGLPDSFEKTLVPNFPNDFQFVKSPNGVVSLKLVRWPEEFAVSTLQERNECGSHYREFKRGQSALAFPMRFPRGYGAQKKVKTWMEEFQKLPYVSPYADSSKIDPNSDLMEKRVVGVLHELLSLTLHKKTKRNYLRSLREELNLPHKFTRIFTRYPGIFYLSLKCKTTTITLREGYQSGKLVDPHPLVRHRDKFYRVMQTGLLYRGDGSLKHEENSSLVQNDELRSEESEEAEVETSDELCEGESSDELCEGEASE 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02306 436 Coils Coil 434 436 - -
Phco2g02306 436 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 39 410 IPR045040 GO:0003723
Phco2g02306 436 MobiDBLite consensus disorder prediction 393 436 - -
Phco2g02306 436 Pfam Plant organelle RNA recognition domain 53 381 IPR021099 GO:0003723
Phco2g02306 436 MobiDBLite consensus disorder prediction 406 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02306 Phco-Chr2 53588697 53597083 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02306 2 53588697 53597083 Phco2g02306 2 53588697 53597083 ECH
Phco2g02306 2 53588697 53597083 Phco6g01216 6 12188793 12190260 PCT