Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02295 ATGCGAAGAGCCAGAAATATGAGACCGAACATAGTTTCTGAGGCAGGGTTGCCTACTAGGATGAATCAATGGTGGGAAAGCATTCCATTTCTCACTTCTGCAGTGGTGGTTGTCTGTGGAGTCATTTACTTGGTTTGCCTTTTGGTTGGATACGATTCCTTTGCCGAGGTTTGCTTCCTGCCATCTGCTGTTGTGTCACGGTTTCAAGTTTACAGAATTTATACTTCCATTCTTTTCCATGGTTCACTGCTTCATGTTCTCTTCAACATGATGGCTTTAGTTCCCTTGGGGTCTGAGCTGGAGAGGATCATGGGCTCAGTTCGCTTGCTATATGTCATTATTTTGTTGGCTACAAGCAATGCGATATTCCATGTTCTCATAGCGCTGCTGGGGGCACACAATCCTGTTCTTACAGATGATTACCTTATGAATGAGTGTGCAATAGGCTTCTCAGGAGTTCTATTTTCAATGATTGTTATAGAGACAAGCTTGAGTGGAGTTCAATCCAGGAGTGTTTTTGGATTGTTTAATGTGCCTGCCAAGTGGTATGCATTCTTCTTGTTGGTAGTATTCCAGCTTCTCATGCAAAATGTTTCACTACTTGGACACCTTTGTGGCATTTTATCTGGGTTTGCATATACATATGGATTATTTAATTTCCTCATACCTGGAACCACTTTTTATTCTTCTATTGAATCCTCCTCCTGGCTTTCATCATGTGTGAGACGTCCAAAATTTATTGTTTGCACTGGTGGAAATCCTTCGGGTTACATTCCTACACATACAAGCCAAAATTCAACAAGTGGATTACTTTCTGGAAATATTTGGAGGAACCTATCTTCATTGATGCCTCAAAGGGAAGTGTCTACTCAGTCAACTGAGGACAGTAGGTTCCCTGGAAGGGGAAGGGCCCTTGGTTCTGGTCAAGGTCAGACTGCTTCTCATCTTCAATCAGATTCAAATCTTCAAGAAAGACTTTTGGAGGATACTAGTCCCAATAATCCTGTAGTTTCATCCACTCCCAGTAACACTCATCAGTTATCAGAAGGAAGGCATTCAGCTGATAATGTAGCTACAGCGACTGGTGTTCCACAGCATCAGGGTGCAGTTGTTTCGGAAGAAGGGATTAGTAAACTTGTATCAATGGGATTTGATAGGACGCAAGTGGAAGTGGCGCTTGCAGCTGCTGATGGTAATCTCAATGTTGCAGTGGAAATACTCATGAGCCAGCAGAGTTAA 1239 0.4262 MRRARNMRPNIVSEAGLPTRMNQWWESIPFLTSAVVVVCGVIYLVCLLVGYDSFAEVCFLPSAVVSRFQVYRIYTSILFHGSLLHVLFNMMALVPLGSELERIMGSVRLLYVIILLATSNAIFHVLIALLGAHNPVLTDDYLMNECAIGFSGVLFSMIVIETSLSGVQSRSVFGLFNVPAKWYAFFLLVVFQLLMQNVSLLGHLCGILSGFAYTYGLFNFLIPGTTFYSSIESSSWLSSCVRRPKFIVCTGGNPSGYIPTHTSQNSTSGLLSGNIWRNLSSLMPQREVSTQSTEDSRFPGRGRALGSGQGQTASHLQSDSNLQERLLEDTSPNNPVVSSTPSNTHQLSEGRHSADNVATATGVPQHQGAVVSEEGISKLVSMGFDRTQVEVALAAADGNLNVAVEILMSQQS 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02295 412 MobiDBLite consensus disorder prediction 307 353 - -
Phco2g02295 412 MobiDBLite consensus disorder prediction 284 353 - -
Phco2g02295 412 Pfam Rhomboid family 66 219 IPR022764 GO:0004252|GO:0016020
Phco2g02295 412 SMART DUF1751_2 61 163 - -
Phco2g02295 412 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 370 410 IPR015940 -
Phco2g02295 412 Pfam UBA/TS-N domain 373 407 IPR015940 -
Phco2g02295 412 PANTHER DER1-LIKE PROTEIN, DERLIN 21 306 - -
Phco2g02295 412 SUPERFAMILY Rhomboid-like 26 220 IPR035952 -
Phco2g02295 412 SMART uba_6 372 409 IPR015940 -
Phco2g02295 412 FunFam Rhomboid-like protein 15 22 219 - -
Phco2g02295 412 CDD UBA_At3g58460_like 373 408 - -
Phco2g02295 412 Gene3D - 22 219 IPR035952 -
Phco2g02295 412 Gene3D - 341 412 - -
Phco2g02295 412 SUPERFAMILY UBA-like 365 411 IPR009060 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02295 Phco-Chr2 53519983 53530610 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02295 2 53519983 53530610 Phco2g02295 2 53519983 53530610 ECH