Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02289 ATGACAACATCGCAAAACCCTAGCCTACTTTCTTCACTCGTCTTCTATTTCAGGATGGAGTCTCAGGTGAAGCATGCTCTTGTTGTCAAAGTTATGGGTCGTACTGGGTCCAGAGGACAGGTGACCCAGGTTAGAGTGAAGTTTTTGGATGATCAGAATCGTCACATCATGAGGAATGTGAAAGGACCTGTTAGAGAAGGAGACATTCTCACCCTACTCGAATCTGAGAGGGAAGCAAGAAGATTGCGCTAG 252 0.4603 MTTSQNPSLLSSLVFYFRMESQVKHALVVKVMGRTGSRGQVTQVRVKFLDDQNRHIMRNVKGPVREGDILTLLESEREARRLR 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02289 83 ProSitePatterns Ribosomal protein S28e signature. 74 82 IPR028626 -
Phco2g02289 83 Pfam Ribosomal protein S28e 22 82 IPR000289 GO:0003735|GO:0005840|GO:0006412
Phco2g02289 83 SUPERFAMILY Nucleic acid-binding proteins 19 83 IPR012340 -
Phco2g02289 83 Gene3D - 17 83 IPR012340 -
Phco2g02289 83 PANTHER 40S RIBOSOMAL PROTEIN S28 19 83 IPR000289 GO:0003735|GO:0005840|GO:0006412
Phco2g02289 83 Hamap 30S ribosomal protein S28e [rps28e]. 19 83 IPR000289 GO:0003735|GO:0005840|GO:0006412
Phco2g02289 83 FunFam 40S ribosomal protein S28 18 83 - -
Phco2g02289 83 CDD S1_S28E 24 83 IPR000289 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02289 Phco-Chr2 53497053 53499116 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02289 2 53497053 53499116 Phco2g02289 2 53497053 53499116 ECH