Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02275 ATGTGGTGGTTTAATGGGAGGCAAGAGAGGGGAGTGAAAAGGAAATGTGGAGGTGAAACTGGTGCTGTAGGATTTGATTTCAGAGTTCTAATATTTGTAAGCTCAAGCATTAAGCAAAGGGGAAAAGCATTGAAAGGTGAGGGAGAGAGACTGAGAGAGACTCACCAACCATACCCCACTTCCACGCCTCTTCTTCTCTCTTCTCACTCCTTCTCTCAGTATCATATCCCCACAAAAACAAAACATACGCTACGCCAACGCACTTCCTCTCCCTCCACCACCGCCATGGATTCCCCTTCCATCTATGGCGTCTCCCACATCTTCACCCTCTTCATCGTCTTCCTTCTACCACTCCCTTCCCTCTCCGCATTCCCTCACAACTCTTCAACCACCCCTCAGGTTAACTCCAACTCCATCCTCGTCGCGCTTCTCGATTCCCATTACACCGAACTAGCCGAGCTCGTCGATAAAGCACTTCTTCTCCAGCAACTTGAAGACGCCGTTGGCAACCACAACATCACCGTCTTCGCGCCGCGAAACCAGGCCCTCGAACGCGACCTCGACCCCGAGTTCAAGCGCTTCCTCCTTGAGCCCCGCAATCTCCGCTCCCTTCAGACACTCCTAATGTCCCACATTCTCCCCACGCGAATCTCCTCTCACCACTGGCCCGCCGCCGACCGCCGCCACGCTACGCTCGGAAACCACCACCACTTGCATTTGGCCACCAAGCCCTCCGGTCAGATGACTGTCGACGCCGCCGAGATCCTCCGCGCTGACGACATCGTCCGTCCCGACGGCGTCATCCACGGCATTGAGCGTCTCATAGTTCCCCGATCTGTCCAGGAGGACTTCAACCGCCGCCGAAACCTCGCTGCTATCTCCGCCGTCATCCCGGAGGGCGCGCCAGAAATCGATCCCCGCACCCACCGCCTCAAGAAGTCCGCCCCCGTCCCCGCCGGCGCCCCACCCGTACTCCCAATCTACGACGCCATGGCGCCGGGACCGTCCATCGCGCCGGCACCTGCTCCGGGACCCGGAGGTCCGAAGCACCACTTCAACGGCGAGCGGCAGGTGAAGGACTTCATCCACACGCTCTTGCATTACGGAGGGTACAACGAAATGGCCGATATTCTCGTTAACCTAACGTCTCTGGCCACCGAAATGGGAAGGCTGGTTTCGGAGGGTTACGTTCTGACCGTTTTGGCCCCAAACGACGAAGCCATGGCGAAGTTAACGACGGATCAGTTGAGCGAACCGGGGGCACCGGAGCAGATTATGTACTATCACATTATTCCCGAGTACCAAACCGAAGAGAGTATGTACAATGCCGTTAGAAGGTTCGGTAAGGTCAGTTACGATACGCTGCGCTTACCCCATAAGGTTCTCGCTCAGGAGTCTGACGGTTCCGTTAAATTCGGTCACGGCGATTCCTCCGCTTACTTGTTCGATCCTGATATTCACACCGATGGAAGGATCTCCGTCCAGGGAATTGACGGCGTTCTTTTCCCCCCGGAGGAAGTGGAAGAACGCAGCCGCCGCACCACTCCACTTGTCAAGGTTGCCGCTAAACCAAGGAGAGGGAAGTTAATGGAAATGGCCTGTAGCATGCTTGGAGCTTTTGGACAAGTTTGCCAATGA 1638 0.5604 MWWFNGRQERGVKRKCGGETGAVGFDFRVLIFVSSSIKQRGKALKGEGERLRETHQPYPTSTPLLLSSHSFSQYHIPTKTKHTLRQRTSSPSTTAMDSPSIYGVSHIFTLFIVFLLPLPSLSAFPHNSSTTPQVNSNSILVALLDSHYTELAELVDKALLLQQLEDAVGNHNITVFAPRNQALERDLDPEFKRFLLEPRNLRSLQTLLMSHILPTRISSHHWPAADRRHATLGNHHHLHLATKPSGQMTVDAAEILRADDIVRPDGVIHGIERLIVPRSVQEDFNRRRNLAAISAVIPEGAPEIDPRTHRLKKSAPVPAGAPPVLPIYDAMAPGPSIAPAPAPGPGGPKHHFNGERQVKDFIHTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIMYYHIIPEYQTEESMYNAVRRFGKVSYDTLRLPHKVLAQESDGSVKFGHGDSSAYLFDPDIHTDGRISVQGIDGVLFPPEEVEERSRRTTPLVKVAAKPRRGKLMEMACSMLGAFGQVCQ 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02275 545 FunFam Fasciclin-like arabinogalactan protein 16 353 504 - -
Phco2g02275 545 Pfam Fasciclin domain 147 277 IPR000782 -
Phco2g02275 545 Pfam Fasciclin domain 393 503 IPR000782 -
Phco2g02275 545 Gene3D FAS1 domain 139 277 IPR036378 -
Phco2g02275 545 ProSiteProfiles FAS1/BIgH3 domain profile. 358 501 IPR000782 -
Phco2g02275 545 Gene3D FAS1 domain 377 504 IPR036378 -
Phco2g02275 545 SUPERFAMILY FAS1 domain 126 278 IPR036378 -
Phco2g02275 545 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 98 545 IPR044654 -
Phco2g02275 545 SUPERFAMILY FAS1 domain 337 505 IPR036378 -
Phco2g02275 545 ProSiteProfiles FAS1/BIgH3 domain profile. 135 275 IPR000782 -
Phco2g02275 545 SMART fasc_3 174 278 IPR000782 -
Phco2g02275 545 SMART fasc_3 399 504 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02275 Phco-Chr2 53374546 53377637 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02275 2 53374546 53377637 Phco2g02275 2 53374546 53377637 ECH