Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02259 ATGGATCCGTTGATGACGCCGCTGGGGCAAATGCTATTGGAGGAGATCACTCCGGTGGTGATGCTTATTTCAACTCCTTCTGTCGAAGAAGCTTCCCTCAAGAACGGCCTCTCCTTCCTCCAGACGTTAACGCCGTTCTGCTCCTTCGACAACATCGACGTGCCTGTTAGGACTGCCAGTGACCAACCCTATCGCCTTCACAAGTTCAAATTGCGCTTGTTCTACGCCTCCGATGTGAAGAGGCCCGATTTGAAGGTAGCTAAAGAGCAATTGAAGCAAGTTATCACGGAGGCAGGGGAGAAAGAGTTTCCTGACTCGAGTTCTGATTTGCCGGAAATTAATCTTGAACTTACCTCGAGTTCTGAATACCAAAATACACCATCTTGGTTTCGGTTTCTCAATAAAGAGCTTGTTCGCGTGGCCTCCTTTTCAGACCATGAAGCTTTTGATCATCCCGTGATATGTCTTCTAGCTGTCTCTTCTAAGGATGAGCAACCTATTAACAGATTTGTTGACTTTTTTAATACCGATAAGCTTCCTTCCCTTCTTAATGATGGTGCAATGGATCCAAAAATTTCAAAGCATTACTTGTTAGTGCATGATAATCAAGATGGTCCTGCAGACAGAGCAAGTAGAATATTGACAGAAATGAGGAATACTTTTGGTACAAGCGATTGTTCGTTGCTTTGTATTAATTCTTCCGTGGATGCTCCATTCAAACATCAAGATAATCCTTGGGCTTCATATATAACTGATTCCTCATCTACTCCCAGTCAAGGTCTTGGTTGCTTTCTTAACACGGATGATATTGATGAGATTAAAGTTCTAATGCAAGATTTATCATCTAAGCACATCATTCCAAATATGGAGCAAAAGATTCGTATACTCAACCAACAGGTTTCTGCAACACGGAAAGGGTTTAAAAACCAAATAAAAAATTTATGGTGGAGAAAAGGGAAAGAAGACGGTGCAGATTCTCTTAGTGGTCCTGCGTATAACTTTAATTCCATTGAATCCCAGATTCGAGTTTTGGGTGATTATGCTTTCATGTTACGAGATTATGAACTTGCCTTGTCAAATTATCGACTAATTTCCACAGATTACAAGATTGATAAAGCCTGGAAACGCTATGCTGGTGTGCAGGAAATGATGGGACTTACTTACTTCATATTGGATCAATCAAGAAAGGAAGCCGAGTATTGCATGGAAAATGCTTTTAACACATATTTAAAGCTTGGATCATTGGGTCAGCTAAATGCAACACGATGTGGTCTGTGGTGGATAGAAATGTTAAAGGCACGTGATCAATATAAGGAGGCTGCTACTGTTTATTTTCGTATTTGTGGTGAGGATATCCTACATTCTGCTGTGATGCTTGAACAAGCATCATACTGCTACTTGTTGTCTAAACCCTCCATGTTACGCAAATATGGATTTCATGTAGTGCTTTCTGGTGAGCAGTATAAAAAGTGTGACCAGATTAAACATGCAATTCGAACATACCGATGTGCTCTTTCTGTTTTTAGAGGAACTACTTGGAGTTACATCAATGATCATGTTCATTTCCATATAGGACAGTGGTATGCTTCTCTTGCGATGTATGACGTGGCTGTCAAGCATATGACAGAAATCTTGTCCTGTAGCCACCAGTCCAAGACAACACAGGAATTATTCCTAGGCGACTTTCTTCAAATTGTGGAGAAAACTGGACGGACGTATGAGGTAACAAAGCTTCAATTGCCTGTAATCAACATCTCTACACTAAGGGTCATCTACGAAGATTTCCGGACATTTGGATCCCCTTCAGCTGCTAACACTAGAGAAGGCTTGTGGCGTTCTTTGGAGGAAGAAATGCTACCATCGTTCTCTGCTGCCAAGACTAATTGGTTGGAGTTGCAATCAAAGCTTATGTTAAAAAAGCACAGTCAAAATGTTTGTGTTGCAGGCGAATCTGTGAAGGTGACTATTGAATTTGAAAATCCTCTGCAAATCTCAATTCCCATATCTAGTGTTACACTCGTATGCAAGTATTCTGCCAGTACTGATGAAGTTATATCAAATGAAATTGAGTCAAGTATGGAGAAAGATAATAAGGTTGACCACTTTAGAAATATGAGCTCTGACAATTCCTCATTTATGGTATCTGAGGTTGATTTATTACTAGGAGGTGGTGAAACAACCATGATCGAATTATCAGTTACTCCCAAGGAAGAGGGTACTCTTGAAATTATTGGTGTTAGGTGGAAACTGTCGGGAACAATTGTGGGCTTTTATGACTTTGAGTTGGGTCAGCCAAAGAAGAATATAAAAGGAAGGAAAACAAAGGACTTGCCAAATGAGAAATTTAAATTTATGGTTATTAAGAGCATACCCAAGCTTCAGGGTTCCATCCACCCTTTACCTGGAAAGGCATATGCTGGAGATTTACGTCAACTTGTTTTGGAATTGAGGAATCCATCGGAGTTTCCTGTTAAGAATCTGAAGATGAAGATAAGTCATCCTAGGTTCCTTATAATTGGGAAGCAGGAAAATGTGATGTCAGAGTTTCCTGCATGTTTAAGAAAGAAGACAGATTCAGTACAAAGTGATGTGCATGCTAATCCTAATATCACATATGACACTGTTTTTTTGTTTCCAGAGGGTACATCAGTTCAAGGTGAAACACCCTTCTTATGGCCTCTTTGGTTTAGGGCTGCTGTTCCAGGTGATATATCTCTTTGCATGAGCATATATTATGAGATGGGAGATGTATCAAGTATCATCAAGTATCGCATTCTTCGCTTGCATTACAATGTGCAGGTATTACCGTCATTGGATGTCTCATTTCAAATCTGTCCTTTCCGATCAAGCTTAGAAGAATTTCTTGTTCGATTGGATGTTGTTAATAAGACTAGCTCAGAAAGTTTCCAAGTTTGTCAGTTGTCATCAGTTGGTCACCAATGGGAAATCTCATTAGTTCAAGCTCCGGATAGTATTTTTCCTTCACAATCATTGATGGCTGGTCAAGCAATATCATGTTTCTTTACACTAAAGAAATCAAGGAGGCTTCCGACCGATGGGGACAACATGTCCACATTGCCTGTCAGAAGTAATGCAAGATTGGTACCCCAAAGCATTGAAGATATAGTTTATGATATAAACAGTGCACCTTTGATCAATTTCCATCATTATGAAAGATTGCAGCAGGAAGTTTCATACAAGGGTGACTTAAATACTGTTGATTTTGTATTAATCTCTTGGCCATTCAAGAGTAGCGACGATGCAGGTTTCTCCAATCCTTCGTCTGTAATGTCCCATCACGCGTGCCACTTCAGTACTGCTAGCACGGGCCCTATTTCGTGGCTAGTGGATGGACCTCAAACCATGCATCATGACTTCTCTGCATCGTTCTGTGAAATAAGTATGAAGATGCATATTCACAATTCAGCTGGTGCCACCGCTTTTGTACGCATTGACACCTTAGATTCAGCTGGTAATGGTGGACATATGAACAGTGTAAATGTGGTTCAATCTGCAACTACTGATAACCAAGCAGGATGGCACGATATCACCCCAGTGAATGAACTCAAAGTCACATCAAATGCTCTGGAAACCCAACCAGGAAAGGCACTATCATTGGAAAGTGCCTCCTCATATATTTGGTCTGGATCAAGCTCAACCCACCTCCACATTGAGGCTATGTCCTCGGTAGAAATTCCTCTTCAGATCTGTGTATTCTCTCCTGGGACATATGACCTGTCAAATTATGCTTTGAATTGGAAACTTCCATACAATGGACAGGGAGATAGTGATGAAAAGAAGCAGCATTCAGGTCAGTGCCAAGGGTATAAATACTATCTTACCGTGCTCCAGTCCACTTGA 3861 0.4074 MDPLMTPLGQMLLEEITPVVMLISTPSVEEASLKNGLSFLQTLTPFCSFDNIDVPVRTASDQPYRLHKFKLRLFYASDVKRPDLKVAKEQLKQVITEAGEKEFPDSSSDLPEINLELTSSSEYQNTPSWFRFLNKELVRVASFSDHEAFDHPVICLLAVSSKDEQPINRFVDFFNTDKLPSLLNDGAMDPKISKHYLLVHDNQDGPADRASRILTEMRNTFGTSDCSLLCINSSVDAPFKHQDNPWASYITDSSSTPSQGLGCFLNTDDIDEIKVLMQDLSSKHIIPNMEQKIRILNQQVSATRKGFKNQIKNLWWRKGKEDGADSLSGPAYNFNSIESQIRVLGDYAFMLRDYELALSNYRLISTDYKIDKAWKRYAGVQEMMGLTYFILDQSRKEAEYCMENAFNTYLKLGSLGQLNATRCGLWWIEMLKARDQYKEAATVYFRICGEDILHSAVMLEQASYCYLLSKPSMLRKYGFHVVLSGEQYKKCDQIKHAIRTYRCALSVFRGTTWSYINDHVHFHIGQWYASLAMYDVAVKHMTEILSCSHQSKTTQELFLGDFLQIVEKTGRTYEVTKLQLPVINISTLRVIYEDFRTFGSPSAANTREGLWRSLEEEMLPSFSAAKTNWLELQSKLMLKKHSQNVCVAGESVKVTIEFENPLQISIPISSVTLVCKYSASTDEVISNEIESSMEKDNKVDHFRNMSSDNSSFMVSEVDLLLGGGETTMIELSVTPKEEGTLEIIGVRWKLSGTIVGFYDFELGQPKKNIKGRKTKDLPNEKFKFMVIKSIPKLQGSIHPLPGKAYAGDLRQLVLELRNPSEFPVKNLKMKISHPRFLIIGKQENVMSEFPACLRKKTDSVQSDVHANPNITYDTVFLFPEGTSVQGETPFLWPLWFRAAVPGDISLCMSIYYEMGDVSSIIKYRILRLHYNVQVLPSLDVSFQICPFRSSLEEFLVRLDVVNKTSSESFQVCQLSSVGHQWEISLVQAPDSIFPSQSLMAGQAISCFFTLKKSRRLPTDGDNMSTLPVRSNARLVPQSIEDIVYDINSAPLINFHHYERLQQEVSYKGDLNTVDFVLISWPFKSSDDAGFSNPSSVMSHHACHFSTASTGPISWLVDGPQTMHHDFSASFCEISMKMHIHNSAGATAFVRIDTLDSAGNGGHMNSVNVVQSATTDNQAGWHDITPVNELKVTSNALETQPGKALSLESASSYIWSGSSSTHLHIEAMSSVEIPLQICVFSPGTYDLSNYALNWKLPYNGQGDSDEKKQHSGQCQGYKYYLTVLQST 1286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02259 1286 SUPERFAMILY TPR-like 432 553 IPR011990 GO:0005515
Phco2g02259 1286 PANTHER TRANSPORT PROTEIN TRAPP 5 1285 IPR024420 -
Phco2g02259 1286 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 640 828 IPR013935 -
Phco2g02259 1286 Pfam ER-Golgi trafficking TRAPP I complex 85 kDa subunit 188 521 IPR024420 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02259 2 53235016 53250563 Phco2g02259 2 53235016 53250563 ECH