Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02250 ATGGCGACGCATCCGCAAACTCCGACCTCATCGAACGCCTTCTCCTTCCTGTCGAAGGGCTGGCGCGAGGTTCGAGACTCGGCGGACGCGGATATCCAACTCATGCGTGACCGAGCGAATTCGTTCAAAGACCTAGCCACGTCGTTCGACCGCGAGCTCGAGCACTTCTTCAATTCGGCGACGCCGCCGTTCTCCGTGCCGGCCATGCGCTCTTCGCCGCCGAGGGAGATCGAGTTCGTCAAGAGTCTGCGCCCGAAGCTGTCGGAGATTCGGCGCGCCTACTCCTCACCTGATTTCAGCAAGAAGGTTCTGGAGAAGTGGCGCCCGAGGTCGCGGATTCGAATTGACCTTTCTGCGATAAAGAACGCTATTGTGTCGGCGGAGGAGGATGGGATTGTGGATTTCGAGAAGAGGGGAAGGAGGTTGAGTTTCTGGGAGGAGTGGAAGAACGAAGGCGAGGGTGAATCTAAGGATTGGGAACCGATTCGTGCATTGAAGATCAGGCTCAAGGAGTTTGAGAAGGGCGGTTCTTCTTTCGAGGCTTTTAAGAACAGTGAATTCGTGGAGAAAGTCAAGTCAAGCTTGAAATCAATGTGCAAGGAACCTCAGGAGTCAAAGGAGGTGCCACCATTGGATGTACCTGAACTTCTTGCCTACTTTGTAAAACAGTCTGGGCCATTTTTGGACCATCTTGGAGTGAAAAGAGACATATGTGACAAGATAGTTGAAAGTTTGTATAACAAACGCAGAAACCATCTTCTATTGCATTCCCTATCTGGGGAAGAGTCTTCTATTGTTGGGAATGGAAACATAAATGATGAGTTGGATTTACGAATAGCAAGCGTCCTTCAGAGCACAGGACACCGTCATGAAGGTGGATTCTGGACAGACCATGCTAAGCATGATCCGTCCGAAAGTGAAAGGCATGTTGCAATAGTCACAACTGCTAGTCTTCCTTGGATGACGGGAACAGCAGTAAACCCCCTATTTCGAGCTGCATATTTATCACAATCTGCAAAGCAGAAAGTCACTCTGTTGGTTCCATGGCTTTGTAAATCAGATCAAGAGCTTGTTTATCCCAGCAGTCTTACTTTTACTTCACCAGAAGAACAGGAAGTTTATATACGTAGCTGGCTTGAAGAAAGGATTGGTTTTAAGGCAGACTTCAAAATTTCTTTTTATCCTGGGAAGTTTTCAAAAGAAAGACGGAGTATAATACCTGCTGGAGATACTTCTCAATTTATACCATCCAGGGATGCTGACATTGCTATCCTGGAAGAGCCGGAACATTTAAATTGGTATCATCATGGCAAACGTTGGACTGACAAATTCAACCATGTTGTTGGTATTGTCCACACAAATTACTTGGAATATATCAAGAGGGAGAAAAATGGGGCACTCCAGGCATTCTTTGTGAAACACATAAACAACTGGGTTACAAGAGCATACTGCCACAAGGTTCTTCGACTCTCAGCTGCTACTCAGGATTTACCCAAGTCTGTAATTTGCAATGTTCATGGTGTGAATCCGAAGTTCTTGAAAATTGGAGAAAAGATTGCTGCAGAGAGGGAGCTAGGGCAGAATTCCTTTACAAAAGGGGCGTATTTCTTGGGAAAGATGGTGTGGGCAAAGGGATATAAGGAGTTGATAGATTTATTAGCAAAGCATGAGGCTGACCTTGATGGCTTCAAGCTGGATGTGTTTGGAAATGGAGAGGATGCTAATGAAGTTCAGAGTGCAGCCAGAAAGTTAGATTTGAATCTCAGCTTTCAGAAAGGAAGAGATCATGCAGACGATTCTATTCACGGGTACAAAGTTTTTATAAATCCTAGCATTAGCGATGTGCTATGCACAGCTACAGCTGAGGCACTTGCCATGGGGAAATTTGTAGTTTGTGCTGATCATCCGTCAAACGAGTTCTTTAGGTCATTTCCCAACTGTTTGACGTACAAGACATCCGAAGACTTTGTGGCAAAAGTAAAAGAAGCATTAGAAAACGAGCCTTATCCTCTAACACCTGAGCAAAGATATCAACTTTCTTGGGAGGCCGCTACTCAAAGATTTATGGAATATTCTGAGCTTGACAGCATCTTGAATAAGGAAAATAATGGTGAAAAGTCGAGCCTAATTAAAGGAAAGCTCGTTGCTAAGTCAGTTTCAATGCCTAATCTGACAGAACTAGTAGATGGAGGCTTAGCATTTGCTCACTATTGTCTCACTGGAAATGAATTCCTGAGATTATGCACAGGAGCAATACCTGGGACACGTGACTACGATAAGCAGCACTGTAAAGACCTTCATCTCTTGCCGCCACAGGTAGAAAATCCTATCTATGGCTGGTGA 2343 0.4528 MATHPQTPTSSNAFSFLSKGWREVRDSADADIQLMRDRANSFKDLATSFDRELEHFFNSATPPFSVPAMRSSPPREIEFVKSLRPKLSEIRRAYSSPDFSKKVLEKWRPRSRIRIDLSAIKNAIVSAEEDGIVDFEKRGRRLSFWEEWKNEGEGESKDWEPIRALKIRLKEFEKGGSSFEAFKNSEFVEKVKSSLKSMCKEPQESKEVPPLDVPELLAYFVKQSGPFLDHLGVKRDICDKIVESLYNKRRNHLLLHSLSGEESSIVGNGNINDELDLRIASVLQSTGHRHEGGFWTDHAKHDPSESERHVAIVTTASLPWMTGTAVNPLFRAAYLSQSAKQKVTLLVPWLCKSDQELVYPSSLTFTSPEEQEVYIRSWLEERIGFKADFKISFYPGKFSKERRSIIPAGDTSQFIPSRDADIAILEEPEHLNWYHHGKRWTDKFNHVVGIVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCHKVLRLSAATQDLPKSVICNVHGVNPKFLKIGEKIAAERELGQNSFTKGAYFLGKMVWAKGYKELIDLLAKHEADLDGFKLDVFGNGEDANEVQSAARKLDLNLSFQKGRDHADDSIHGYKVFINPSISDVLCTATAEALAMGKFVVCADHPSNEFFRSFPNCLTYKTSEDFVAKVKEALENEPYPLTPEQRYQLSWEAATQRFMEYSELDSILNKENNGEKSSLIKGKLVAKSVSMPNLTELVDGGLAFAHYCLTGNEFLRLCTGAIPGTRDYDKQHCKDLHLLPPQVENPIYGW 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02250 780 PANTHER DIGALACTOSYLDIACYLGLYCEROL SYNTHASE 2, CHLOROPLASTIC 8 778 IPR044525 GO:0046481
Phco2g02250 780 FunFam Digalactosyldiacylglycerol synthase 1, chloroplastic-like 397 507 - -
Phco2g02250 780 Gene3D Glycogen Phosphorylase B; 532 686 - -
Phco2g02250 780 CDD Glycosyltransferase_GTB-type 439 641 - -
Phco2g02250 780 FunFam Digalactosyldiacylglycerol synthase 1, chloroplastic 508 666 - -
Phco2g02250 780 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 310 690 - -
Phco2g02250 780 Pfam Glycosyl transferases group 1 534 670 IPR001296 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02250 Phco-Chr2 53131846 53138599 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02250 2 53131846 53138599 Phco2g02250 2 53131846 53138599 ECH