Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02225 ATGGCCCTGTCCCGTGGATCAATCCTCACTCGATCAGTGTGGTCCTCCAATCTGGAATCGGAGTTCGAGTTAATCCGATCCGTCATCGACTCCTTCCCTCTCATCTCGATGGACACCGAGTTCCCCGGCGTCGTCGTGCGCCCCGACACCTGCGACCCCTCCTTCCGCCACCGCCAACCAGCCGCGCACTACGCCGTGCTTAAAGCCAACGTCGACCGCCTCCACCTGATCCAGATCGGTCTTACTCTCTCCGATCAAGTGGGAAACCTTCCCACACTCGGCACCTCCAACGCCTTCGTCTGGGAGTTCAACTTCCGAGACTTCGACGTATCGCGTGACGCCCATGCTCACGATTCCGTTGAGTTGCTACGGCGTCAGGGCATCGATTTTGAGAAGAATCGGGAGTTTGGGATCGACTCTGTACGGTTCGCCGAGCTCATGATGTCTTCTGGTCTGGTCTGCGATGACGCGGTTAGCTGGGTAACGTTTCACAGTGCCTATGATTTCGGATACCTGGTGAAATTGTTGACCCAGCGCACTCTGCCGGAGGAATTGGCAGAATTTCTCCGTCTGGTGAGGGTGTTTTTCGGTGAGAGAGTGTTTGATGTGAAGCACTTGATGAGGTTTTGCTCAAATCTTCATGGAGGTTTGGATCGAGTATGCCAGTCGCTGAATGTGGAACGAGTTGTAGGGAAAAGCCACCAGGCCGGTTCTGATAGCTTGCTCACTCTGCACGCTTTTCAGAATATAAGAGAGGTTTATTTTGGCAAGGCTGATGGACTTGTTCAGTATGCTGGTGTCTTGTATGGTTTGGAGAAGGAAACTGATCCTGAGGATGGAGGATATGGAGCTGGGAATCAACAGCCCATGTATCTATGGTGGAATTTCTCAAGGGGACCAGGAAACATAGCTGTCAGATCTCAGAAAGCAAGAAGGAAAGAAATTCAAAGAAAAGGCTTTGGGGGGCTGTTATATGAACTTGACAACATAAAAAGGATTTTGAGAAAAGGTGATCGCGGAGGGTTGAGGGATGATTGTAGTAGAACACTAAGAGTCAGGAGAAGAGGACAAATACCAGCTGATTAG 1086 0.5101 MALSRGSILTRSVWSSNLESEFELIRSVIDSFPLISMDTEFPGVVVRPDTCDPSFRHRQPAAHYAVLKANVDRLHLIQIGLTLSDQVGNLPTLGTSNAFVWEFNFRDFDVSRDAHAHDSVELLRRQGIDFEKNREFGIDSVRFAELMMSSGLVCDDAVSWVTFHSAYDFGYLVKLLTQRTLPEELAEFLRLVRVFFGERVFDVKHLMRFCSNLHGGLDRVCQSLNVERVVGKSHQAGSDSLLTLHAFQNIREVYFGKADGLVQYAGVLYGLEKETDPEDGGYGAGNQQPMYLWWNFSRGPGNIAVRSQKARRKEIQRKGFGGLLYELDNIKRILRKGDRGGLRDDCSRTLRVRRRGQIPAD 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02225 361 FunFam Putative CCR4-associated factor 1 7 1 275 - -
Phco2g02225 361 Pfam CAF1 family ribonuclease 13 138 IPR006941 -
Phco2g02225 361 SUPERFAMILY Ribonuclease H-like 5 272 IPR012337 -
Phco2g02225 361 Gene3D - 2 275 IPR036397 GO:0003676
Phco2g02225 361 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 10 272 IPR039637 GO:0004535|GO:0030014
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02225 Phco-Chr2 52930583 52933910 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02225 2 52930583 52933910 Phco2g02225 2 52930583 52933910 ECH