Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02221 ATGGCTTCACTTCTCAAAAGGCTTGAAGGAGAAGTGGCGATAATCACAGGGGGAGCTAGCGGCATTGGAGCTGCCACCGCCAAACTATTCCTCCAACACGGTGCCAAAGTGATCATTGCCGACGTGCAAGACGCGTTAGGCCACTCCCTTTGCAAAACCTTCAGCACAAACACCCCCATTCACTATCTTCACTGCGACGTAACCAGTGACTCAGACATAAAAAACGTGGTTGAAGTCGCCATAACCAAATACGGAAAACTCGACATAATGTACAACAATGCCGGCATCTCGGGAGACTCAAACAGATCCATAGTAACATCCGATGAGGAAGAATTGAAAAGAGTTTTCGAGGTTAATGTGTACGGAGCTTTCTTGGGCTCCAAGCATGCGGCGAGGTTCATGGTTCCAGCGAAGAGAGGGGTGATTCTCTTCACTTCGAGCGTTGCTTCAATTCTGGGCGGCGAAACGACGCATGCTTACGCCGTTTCAAAGCACGCGGTGGTGGGGTTGATGAAGAACCTGTGCGTTGAACTGGGGCAGCATGGGATCAGAGTGAATTGTGTTTGTCCAGGTGGCGTTCCCACTCCGATGCTGAACAAGGCGTTGAAGATGAACGAGAAGGAGACGCAGGAAGTGCTGTGCAAGGTTGCGGTGTTGAAAGGGACGGTTCTTGAAGCTGAAGACATAGCCAAAGCTGCGCTATATTTGTGCAGCGACGAGGCCAAGTTCGTGAGTGGAGTTAACTTTGTTCTGGACGGTGGTTATAGCACCACCAATATGTCATTCACTTCAGTGCTGAATGGTCTCATGGATAACCACATCAATAACAACCATGCTTAG 840 0.4964 MASLLKRLEGEVAIITGGASGIGAATAKLFLQHGAKVIIADVQDALGHSLCKTFSTNTPIHYLHCDVTSDSDIKNVVEVAITKYGKLDIMYNNAGISGDSNRSIVTSDEEELKRVFEVNVYGAFLGSKHAARFMVPAKRGVILFTSSVASILGGETTHAYAVSKHAVVGLMKNLCVELGQHGIRVNCVCPGGVPTPMLNKALKMNEKETQEVLCKVAVLKGTVLEAEDIAKAALYLCSDEAKFVSGVNFVLDGGYSTTNMSFTSVLNGLMDNHINNNHA 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02221 279 Pfam Enoyl-(Acyl carrier protein) reductase 17 256 - -
Phco2g02221 279 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 IPR002347 -
Phco2g02221 279 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 IPR002347 -
Phco2g02221 279 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 IPR002347 -
Phco2g02221 279 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 6 259 - -
Phco2g02221 279 Gene3D - 2 270 - -
Phco2g02221 279 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 147 175 IPR020904 GO:0016491
Phco2g02221 279 FunFam Short-chain dehydrogenase reductase 1 262 - -
Phco2g02221 279 PRINTS Glucose/ribitol dehydrogenase family signature 85 96 IPR002347 -
Phco2g02221 279 PRINTS Glucose/ribitol dehydrogenase family signature 134 150 IPR002347 -
Phco2g02221 279 PRINTS Glucose/ribitol dehydrogenase family signature 160 179 IPR002347 -
Phco2g02221 279 PRINTS Glucose/ribitol dehydrogenase family signature 219 239 IPR002347 -
Phco2g02221 279 PRINTS Glucose/ribitol dehydrogenase family signature 12 29 IPR002347 -
Phco2g02221 279 PRINTS Glucose/ribitol dehydrogenase family signature 181 198 IPR002347 -
Phco2g02221 279 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 257 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02221 Phco-Chr2 52864892 52865994 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02221 2 52864892 52865994 Phco2g02221 2 52864892 52865994 ECH