Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02220 ATGCTGAAGGTGATTAAGAACAATTTGTATTTTCTCCCTTCTTATCTAAGATGCTACCACTTTTTCTCCCACAATGTGTTTAATGAGCCAGGAAGATCCAATTGGCAGGGATTATCATGGTTACATTTATCAATGGCAAGCTCAAGCTCAAGCTCTGATGGTAATAGAAGGTTGGAAGGAAAAGTTGCAGTGATAACAGGAGGAGCTAGTGGAATCGGGAAACGCACCGCAGAAGTGTTCGCCCAGCACGGAGCAAAAGTAGTGATCGCTGACATCCAAGACGAACTGGGGCATTCGGTGGCTGAGTCCATAGGGCCATCAACGTGTTGTTATGTCCACTGCGATGTCACTGATGAGGATCAGGTCAAAAATGCTATCCACAGAGCAGTTCAAACTTATGGCAAGCTCGACATCATGTTCAACAACGCCGGCATAGCTGATCCCAACAAGCATCGAATCATTGATAACGATAAAGCAGATTTTGAACGTGTACTCGCCGTCAATGTCACAGGTGTTTTCCTTGGGATGAAGCATGCGGCACAGGCGATGATCCCAGGACGTAGTGGCAGCATTATCTCAACGGCAAGCATAAGCTCTTACGTCGGTGGTGCAGCCTCCCATGCATATTGTTGTGCCAAGCACGCGGTGGTTGGTCTAACTAAAAATGCAGCGGTTGAGCTTGGACAGTTCGGAATCAGGGTTAATTGTTTGTCACCTTACGCTCTTGCCACTCCCTTGGCCACCAGCTTCGTTGGAGCTAATGATGAGCAGCTTGAGACTATCATGAACTCACTCGCTAATCTCAAGGGTGTCACCCTCAAAGCTGATGATGTGGCTAATGCAGCACTCTATTTTGCTAGTGATGATTCAAGGTACGTTAGTGGCCATAACTTGCTCATCGATGGAGGCTTCAGCATTGTTAATCCTTCCTTTCACATGTTTCAGTACTCCCAATCTTGA 960 0.4667 MLKVIKNNLYFLPSYLRCYHFFSHNVFNEPGRSNWQGLSWLHLSMASSSSSSDGNRRLEGKVAVITGGASGIGKRTAEVFAQHGAKVVIADIQDELGHSVAESIGPSTCCYVHCDVTDEDQVKNAIHRAVQTYGKLDIMFNNAGIADPNKHRIIDNDKADFERVLAVNVTGVFLGMKHAAQAMIPGRSGSIISTASISSYVGGAASHAYCCAKHAVVGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGANDEQLETIMNSLANLKGVTLKADDVANAALYFASDDSRYVSGHNLLIDGGFSIVNPSFHMFQYSQS 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02220 319 PRINTS Glucose/ribitol dehydrogenase family signature 62 79 IPR002347 -
Phco2g02220 319 PRINTS Glucose/ribitol dehydrogenase family signature 134 145 IPR002347 -
Phco2g02220 319 PRINTS Glucose/ribitol dehydrogenase family signature 183 199 IPR002347 -
Phco2g02220 319 PRINTS Glucose/ribitol dehydrogenase family signature 230 247 IPR002347 -
Phco2g02220 319 PRINTS Glucose/ribitol dehydrogenase family signature 209 228 IPR002347 -
Phco2g02220 319 PRINTS Glucose/ribitol dehydrogenase family signature 268 288 IPR002347 -
Phco2g02220 319 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 145 IPR002347 -
Phco2g02220 319 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 209 228 IPR002347 -
Phco2g02220 319 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 189 197 IPR002347 -
Phco2g02220 319 Gene3D - 46 316 - -
Phco2g02220 319 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 55 308 - -
Phco2g02220 319 Pfam Enoyl-(Acyl carrier protein) reductase 67 305 - -
Phco2g02220 319 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 59 307 IPR036291 -
Phco2g02220 319 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 196 224 IPR020904 GO:0016491
Phco2g02220 319 FunFam Short-chain dehydrogenase reductase 45 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02220 Phco-Chr2 52853548 52860449 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02220 2 52853548 52860449 Phco2g02220 2 52853548 52860449 ECH