Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02213 ATGTACTGTGTTTTTAAATTCAGTTATGGTTCTGTCGGACAAGTCCTCTCTCTCTATGGACTAATCAAGATATATGTACAATCCCATCCCGTTTACTCTGCGAATGTGCCATGCAACATAAACTCTTCATTTCCCTTGTTCACTGTCTGCAACATCGAATTGAATTCCATGGCGGCTGTGAGAAAAATAATTCAGGCCAATAAAAATAAAACCTTTGCGCCATCTCTTTTAGCTTTTCGCCGAGGAATTGCTTACAAGCTTTTTGTTGGAGGACTGTCCTTCTACACCACAGAGAAAGCATTGTCAGATGCATTTTCCAACTACGGGCAAGTTATTGAAGCAAAAGTTGTAACAGATAGGGTGTCAGACAGATCTAAGGGATTTGGGTTTGTCACCTTTGCTTCACCAGACGAGGCTGAGAATGCCATAACAGAGATGAAAGGAAAGACATTAAATGGACGAGTTATCTTTGTTGATTATGCAAAACCCAATATCAACGCTAATGGTGCGATGCCAATTGCCAGAGGACCTCCTGAACCAACACCAGACACTTGA 555 0.4144 MYCVFKFSYGSVGQVLSLYGLIKIYVQSHPVYSANVPCNINSSFPLFTVCNIELNSMAAVRKIIQANKNKTFAPSLLAFRRGIAYKLFVGGLSFYTTEKALSDAFSNYGQVIEAKVVTDRVSDRSKGFGFVTFASPDEAENAITEMKGKTLNGRVIFVDYAKPNINANGAMPIARGPPEPTPDT 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02213 184 Gene3D - 56 178 IPR012677 -
Phco2g02213 184 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 81 165 - -
Phco2g02213 184 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 87 156 IPR000504 GO:0003723
Phco2g02213 184 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 85 163 IPR000504 GO:0003723
Phco2g02213 184 SUPERFAMILY RNA-binding domain, RBD 85 175 IPR035979 GO:0003676
Phco2g02213 184 SMART rrm1_1 86 159 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02213 Phco-Chr2 52797574 52801946 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02213 2 52797574 52801946 Phco2g02213 2 52797574 52801946 ECH