Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02207 ATGGATTCCATTGAAGTAAACTTCACCATGCAAAGTCATACAGAGGAAAAACAATGTGTCCACACCTATGTTGCTCAGTGGCCTATTTCCTCTCTAGCATGGTCAATGCGTCGTGACAAAAGCCCTCGCCTTGCCATTGGCAGTTACTTGGAAGATTACACCAACAAGGTTGAACTTGTGCACTTCAACTACGACACCTTCAATTTCACCACCGACCCTCGTTTTGCGTTTGACCACCCTTATGCACCAACAAACATCATGTTCTTTCCCTCCGAGGATGACACAAATCCAGACCTCATTGCCACCTCAGGTGACAACGTTAGATTATGGGAAATCCACGAAGATCATATTCAACTAAAGTCCCCCCTCATTGGTAACAAAGTTAGTGATCACTCGGCTATTACCTCGTTTGATTGGGCTGCGTTTGATACTCGTCTAATAGCCACTTCTAGTGTAGACACCACATGCACCATCTGGGACATTGAAAGGGAAGTCATGAAGGCGCAGCTAGTGGCACATGACAAAGAAGTGTATGACATTTCATGGGGTGGGTTCAATGTCTTTGCTTCCGTGTCAGGTGATGGTTCTGTGAGGGTGTTTGACTTAAGAGACAAGGAGAAATCTACTATAATTTATGAAAATCCTGTGCAGGATTGTCCCTTACTCCGATTGGAATGGAATAAAAGTGATCCAAGATTTATGGCCACAGTGGGATTGGACAGCAACAAGGTGGTGATATTGGATATCAGGCTTCCAACCACACCATTTATGGAGTTGAGCAAACATAGAACATGTGTTAATGCGATGTCATGGTCCCCAGATTTTGGACGACATTTGTGCTCTGTTGGCGATGATGCAAGGGCCTTCATCTGGGACGTTATGGACTCGAGGTTTCCATCAAGGAATGGTTGTGAGGTAGAGCCAGTGATGTGGTACGGATCATCAGCTGAAATCAACCACGTGCGTTGGTCCCCAGTGCAACTGGATTGGATTGCTCTTGCTTTCTTCAACAACTTACAACTACTCAAAGTCTAG 1035 0.4512 MDSIEVNFTMQSHTEEKQCVHTYVAQWPISSLAWSMRRDKSPRLAIGSYLEDYTNKVELVHFNYDTFNFTTDPRFAFDHPYAPTNIMFFPSEDDTNPDLIATSGDNVRLWEIHEDHIQLKSPLIGNKVSDHSAITSFDWAAFDTRLIATSSVDTTCTIWDIEREVMKAQLVAHDKEVYDISWGGFNVFASVSGDGSVRVFDLRDKEKSTIIYENPVQDCPLLRLEWNKSDPRFMATVGLDSNKVVILDIRLPTTPFMELSKHRTCVNAMSWSPDFGRHLCSVGDDARAFIWDVMDSRFPSRNGCEVEPVMWYGSSAEINHVRWSPVQLDWIALAFFNNLQLLKV 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02207 344 ProSitePatterns Trp-Asp (WD) repeats signature. 279 293 IPR019775 -
Phco2g02207 344 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 259 293 - -
Phco2g02207 344 PANTHER WD REPEAT CONTAINING PROTEIN 10 344 IPR045159 -
Phco2g02207 344 SMART WD40_4 70 111 IPR001680 GO:0005515
Phco2g02207 344 SMART WD40_4 252 292 IPR001680 GO:0005515
Phco2g02207 344 SMART WD40_4 121 160 IPR001680 GO:0005515
Phco2g02207 344 SMART WD40_4 207 248 IPR001680 GO:0005515
Phco2g02207 344 SMART WD40_4 163 201 IPR001680 GO:0005515
Phco2g02207 344 Pfam WD domain, G-beta repeat 170 201 IPR001680 GO:0005515
Phco2g02207 344 Pfam WD domain, G-beta repeat 129 160 IPR001680 GO:0005515
Phco2g02207 344 ProSiteProfiles Trp-Asp (WD) repeats profile. 170 210 IPR001680 GO:0005515
Phco2g02207 344 Gene3D - 17 341 IPR015943 GO:0005515
Phco2g02207 344 SUPERFAMILY WD40 repeat-like 27 338 IPR036322 GO:0005515
Phco2g02207 344 ProSiteProfiles Trp-Asp (WD) repeats profile. 259 301 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02207 Phco-Chr2 52739591 52740625 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02207 2 52739591 52740625 Phco2g02207 2 52739591 52740625 ECH