Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02201 ATGGTTTTCCCCAACTCTAGCACCCTTTTTCTCTTGCTTTTATCCCTTCTGTTACTCATCAACAATGGCGTTCAAGCTTTTCATAAAATATATCCCCATCTTCAATCTGTTTCAGTAATTTCCATTGCTGCACAGCACAGAACTGGATACCATTTTCAACCTCCTAAAAACTGGATCAATGGACCCATGTACTACAATGGAATCTACCATTTTTTCTATCAGTACAACCCAAAGGGTTCGGTGTGGGGTAACATAGTGTGGGCCCACTCAGTATCAAAGGATCTGATAAACTGGGAAGCTGTTGAACACGCGCTTTATCCATCGAAGCCTTTCGACAAATTCGGGTGTTGGTCGGGCTCAGCGACTGTAGTCCCAGGTAAGGGACCCATAATCCTCTACACTGGAGTCGTGGACGAGGCACAAACTCAAGTCCAATGTTACGCTGTACCCGAAGACCTCAAGGACCCGCTCCTTCGAAAATGGGTAAAACCAGACAATTTGAACCCGGTTTTGGTCCCCGACAAAGAAGTAAACGGCAGTGCGTTTAGGGATCCGACAACGGCTTGGTGGAGCAAAGATGGACACTGGAGAATATTGGTGGGTAGTAGAAGGAAGGAAAGAGGAATGGCTTATTTGTACAGAAGCAAAGACTTTAGGAGATGGGTTCGGGCCAAACACCCGCTCCATTCCAAGGGCGACACGGGTATGTGGGAGTGCCCCGATTTTTACCCTGTTTCGCTTAAAAGCAATTTGGGGTTGAACAGTGTGGAGGAGGGAAAACAAGTGAAACACGTGTTGAAAAATAGTCTTGATTTGGCTAGGTATGACTACTACACTCTGGGAACCTATGAAACTGATAAGGATAAGTATGTTCCTGACAACACTTCCGAAGATGGTTGGGGTGGATTAAGGTATGATTATGGCAATTTTTATGCTTCCAAGTCCTTTTTTGACCCTAGCAAGAACAGAAGAGTGATATGGGGTTGGGCTAACGAGTCTGATACCGAACAAGACGATGTTCGTAAAGGATGGGCAGGGATTCAGGCGATTCCGCGAACAGTGTGGCTGCATCCTAATGGGAGGCAATTGTTACAATGGCCAGTTGAAGAATTAAATACTCTTAGAGGGAAAGAAGTTAACATGAACGGTCAGAAGCTGGAGAAGGGACATCATGTTGAAGTAAAAGGAATCACTGCTGCACAGGCAGATGTGGAAGTTAAATTTTCATTCTCTAGTTTGGACAAGGCAGAGACATATGATCCTAAGTGGGTTCATGCACAGGATGTTTGTGACCAAAAAGGTTCAAAAGTCCAAGGCGGTGTTGGACCATTTGGGCTTTTGACTTTAGCTTCTGAAAATCTGGAGGAGTTTACTCCTGTGTTTTTCAGAATTTTCAAAAATCAAAACAAGCATGTAATTCTCATGTGCTCTGATGCCAGAAGTTCCTCTTTGAAGAGTAAATTGTACAAGCCTGCATTTGCTGGTTTTGTAGACTCGGATTTGACAACTGATAAGAAAATTTCTCTTAGGAGTTTGATTGATCACTCAGTAGTGGAAAGTTTTGGAGAAGGAGGAAAGACAAACATACTATCTCGAGTTTATCCACAGCTTGCAGTGACAAATCAAGCTCATCTTTTCGTGTTCAACAATGGCACTGAACCAATCACCGTGGAAAATCTAAAAGCATGGAACATGAAATCTGCTGATATAAAATGA 1716 0.4341 MVFPNSSTLFLLLLSLLLLINNGVQAFHKIYPHLQSVSVISIAAQHRTGYHFQPPKNWINGPMYYNGIYHFFYQYNPKGSVWGNIVWAHSVSKDLINWEAVEHALYPSKPFDKFGCWSGSATVVPGKGPIILYTGVVDEAQTQVQCYAVPEDLKDPLLRKWVKPDNLNPVLVPDKEVNGSAFRDPTTAWWSKDGHWRILVGSRRKERGMAYLYRSKDFRRWVRAKHPLHSKGDTGMWECPDFYPVSLKSNLGLNSVEEGKQVKHVLKNSLDLARYDYYTLGTYETDKDKYVPDNTSEDGWGGLRYDYGNFYASKSFFDPSKNRRVIWGWANESDTEQDDVRKGWAGIQAIPRTVWLHPNGRQLLQWPVEELNTLRGKEVNMNGQKLEKGHHVEVKGITAAQADVEVKFSFSSLDKAETYDPKWVHAQDVCDQKGSKVQGGVGPFGLLTLASENLEEFTPVFFRIFKNQNKHVILMCSDARSSSLKSKLYKPAFAGFVDSDLTTDKKISLRSLIDHSVVESFGEGGKTNILSRVYPQLAVTNQAHLFVFNNGTEPITVENLKAWNMKSADIK 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02201 571 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 379 565 - -
Phco2g02201 571 SUPERFAMILY Arabinanase/levansucrase/invertase 44 368 IPR023296 -
Phco2g02201 571 Gene3D Glycosyl hydrolase domain; family 43 56 380 IPR023296 -
Phco2g02201 571 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 55 379 - -
Phco2g02201 571 Pfam Glycosyl hydrolases family 32 C terminal 370 564 IPR013189 -
Phco2g02201 571 SUPERFAMILY Concanavalin A-like lectins/glucanases 367 568 IPR013320 -
Phco2g02201 571 CDD GH32_Fruct1-like 57 356 - -
Phco2g02201 571 Gene3D - 381 565 - -
Phco2g02201 571 Pfam Glycosyl hydrolases family 32 N-terminal domain 51 367 IPR013148 -
Phco2g02201 571 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 38 569 - -
Phco2g02201 571 SMART glyco_32 51 525 IPR001362 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02201 Phco-Chr2 52686420 52690518 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02201 2 52686420 52690518 Phco2g02201 2 52686420 52690518 ECH