Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02199 ATGGAGGTGAGAGAAGAAGATGGAGTTACAGGGAGAAAGAATCTGATTTCTGCCATCAGAGATCCATGGGCCTTGGAGCAATTAAGTGTAATTTTTCGTGCTCGGCTTCAAAAGTACATAGAAGAAGGGAACATTGCCTCCGAGGTTAGGTTTTGGTTTTGGCACTTTCGAGGAGTGAACCAGATTTTCTTTGTTACTGTCATCTCTCATCTCATCACCATGAGCAGATCAGGGCAACCACCGGATTTGAAGAAGTACATGGACAAGAAGCTTCAGATCAAGCTGAATGCTAATCGCATGATTGTTGGTACGCTCCGTGGCTTTGACCAGTTTATGAATTTAGTTGTTGACAACACTGTGGAAGTGAATGGCAATGAGAAAACTGACATAGGGATGGTGGTAATCAGAGGAAATAGTGTGGTCACAGTTGAGGCACTTGAACCTGTGAACAGAACCTGA 459 0.4379 MEVREEDGVTGRKNLISAIRDPWALEQLSVIFRARLQKYIEEGNIASEVRFWFWHFRGVNQIFFVTVISHLITMSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVVDNTVEVNGNEKTDIGMVVIRGNSVVTVEALEPVNRT 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02199 152 Pfam LSM domain 82 144 IPR001163 -
Phco2g02199 152 SUPERFAMILY Sm-like ribonucleoproteins 82 149 IPR010920 -
Phco2g02199 152 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN 76 151 IPR044641 -
Phco2g02199 152 CDD Sm_G 79 147 IPR034098 GO:0000387|GO:0005681
Phco2g02199 152 SMART Sm3 81 145 IPR001163 -
Phco2g02199 152 Gene3D - 72 151 - -
Phco2g02199 152 FunFam Small nuclear ribonucleoprotein G 74 149 - -
Phco2g02199 152 ProSiteProfiles Sm domain profile. 78 149 IPR047575 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02199 Phco-Chr2 52663954 52665378 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02199 2 52663954 52665378 Phco2g02199 2 52663954 52665378 ECH