Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02198 ATGACGGAAGTGCTTCAGTTGCCTTCATCGTCAAGCTGTGGTGGTCTCACACCCAATGATGGGTCGCACCCAAGTTCCCTTATTAACGCTCCCACTGTGGAAGAAGGGGTGCTGCCACAGTCCCCTTTGGATTTGGAAGCTGAAGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAGAGAAAAAGGGAAAGAGAAAGGGATCAGCTTTCCATTTTGACCCTTTTGATAGCTACGTTTCGGAAGTCTCTGATTGGGTGCAGCACTACAGCTTCTTCATCTTCTTCTTCTTCTTCCATGGAGATTGGGTGGCCTTCCAATGTGAGACACGTGGCTCATGTCACCTTCGATCGCTTCCATGGTTTTCTTGGTTTGCCTGTTGAGTTTGAACCTGAAGTTCCCAGGAGGTCCCCCAGTGCTAGCGCAAATGTTTTTGGAGTTTCAACAGAATCTATGCAGCTCTCTTTTGACGCCAGAGGAAATAGTGTACCTACAATACTGCTGTTAATGCAAAGACATTTGTATGCACAAGGAGGCCTGCAGGCTGAAGGAATCTTCAGAATCAATGCTGAAAACGGTCAAGAGGAGTTTGTGAGGGAACAATTAAACAGAGGAGTTGTACCAGATGGCATTGATGTGCATTGCTTGGCAGGTCTCATAAAGGCTTGGTTCAGAGAACTACCTACTGGGGTATTGGACCCTCTCTCACCTGAGCAGGTGATGCAATCCCAGTCAGAAGAAGAATGTGCTCAGCTTGTGAGGCTTCTTCCTCCAACAGAAGCTGCTTTGCTAGATTGGGCAATAAACTTAATGGCAGATGTTGCTCAAATGGAAAACTTGAACAAGATGAATGCACGTAATGTTGCCATGGTTTTTGCACCAAACATGACCCAAATGGCGGATCCTTTGACTGCTTTGATGTATGCAGTACAAGTCATGAATTTTCTGAAGACACTGGTAGTAAAGACACTTAAGGAAAGGGAGGAGTCTATTGTAAAATCAAATCCTGGCCGAAACCTTAATTCTTTTGACGATGATGGACACCATAGCAATTCAGAAATGCTACACAAGGATGGCAGTGAAAGTGGAAATGATTGTAGTGATGAATATGAAGATACATTATTTGTCGCTGCAGAGCCGTTTCAACAAAGCCCTAGTCATCTTACTGAAGACGGCTGTGAAACTGAATCCAAAAGGTTGCCAACATCTACTGAAAATCTTATTTCTAGTGGAAATAGGTTGTTGGTTGACAGTTGTCCTTGCAATCTTGTGTCTCAAATTTGCTCTTTGGCAATTGGGCTTCAAGACTATGGCCTCACTACTGGGCAGACAAAGGGGGATCAAGCAAAATTTTGCAGGAGCAAAAGCCTTCAGTTGAGTACTTATGATATAGACAAATGTTCCAATAAGGTGATTGAGCTTCCGGTAGCAGGAGCTGCAGAGAAGAACCGCGGAACCGCTATTATTGGGCGTATAAATTCAAGAACGGAGTTGGCTGAAGCTTGGCGTTGA 1509 0.4447 MTEVLQLPSSSSCGGLTPNDGSHPSSLINAPTVEEGVLPQSPLDLEAEEEEEEEEEEEERKRERERDQLSILTLLIATFRKSLIGCSTTASSSSSSSSMEIGWPSNVRHVAHVTFDRFHGFLGLPVEFEPEVPRRSPSASANVFGVSTESMQLSFDARGNSVPTILLLMQRHLYAQGGLQAEGIFRINAENGQEEFVREQLNRGVVPDGIDVHCLAGLIKAWFRELPTGVLDPLSPEQVMQSQSEEECAQLVRLLPPTEAALLDWAINLMADVAQMENLNKMNARNVAMVFAPNMTQMADPLTALMYAVQVMNFLKTLVVKTLKEREESIVKSNPGRNLNSFDDDGHHSNSEMLHKDGSESGNDCSDEYEDTLFVAAEPFQQSPSHLTEDGCETESKRLPTSTENLISSGNRLLVDSCPCNLVSQICSLAIGLQDYGLTTGQTKGDQAKFCRSKSLQLSTYDIDKCSNKVIELPVAGAAEKNRGTAIIGRINSRTELAEAWR 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02198 502 PANTHER MKIAA1688 PROTEIN 1 380 IPR044785 GO:0005096
Phco2g02198 502 SMART RhoGAP_3 160 323 IPR000198 GO:0007165
Phco2g02198 502 MobiDBLite consensus disorder prediction 1 29 - -
Phco2g02198 502 MobiDBLite consensus disorder prediction 341 363 - -
Phco2g02198 502 MobiDBLite consensus disorder prediction 331 364 - -
Phco2g02198 502 Pfam RhoGAP domain 163 297 IPR000198 GO:0007165
Phco2g02198 502 SMART PBD_5 101 135 IPR000095 -
Phco2g02198 502 FunFam Rho GTPase-activating protein 5 131 324 - -
Phco2g02198 502 Coils Coil 43 68 - -
Phco2g02198 502 CDD CRIB 99 139 - -
Phco2g02198 502 ProSiteProfiles Rho GTPase-activating proteins domain profile. 146 331 IPR000198 GO:0007165
Phco2g02198 502 MobiDBLite consensus disorder prediction 1 65 - -
Phco2g02198 502 SUPERFAMILY GTPase activation domain, GAP 141 319 IPR008936 -
Phco2g02198 502 ProSiteProfiles CRIB domain profile. 101 114 IPR000095 -
Phco2g02198 502 CDD RhoGAP 163 318 - -
Phco2g02198 502 Gene3D Rho GTPase activation protein 133 333 IPR008936 -
Phco2g02198 502 Gene3D CRIB domain 95 130 IPR036936 -
Phco2g02198 502 Pfam P21-Rho-binding domain 100 127 IPR000095 -
Phco2g02198 502 MobiDBLite consensus disorder prediction 44 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02198 Phco-Chr2 52653574 52657321 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02198 2 52653574 52657321 Phco2g02198 2 52653574 52657321 ECH