Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02180 ATGGACCACCTTCCCGTTGAAGTGATCGGTAACATATTGTCTCTTCTCGGCTCTGCCCGGGATGTTGTGGTTGCTTCTGCAACTTGCAAGAAATGGAAGGAAGCATGGCGCAGTCACCTTCACAGTCTTTCTTTCAATTTTTGTGATTGGCCTCTCTATCATGACTATACTTCTCCTAGGTTGGAAATGCTCATCACTCAGACCATTTTTCAAACCAAGGCACTGCAGTTTTTGACCATTTTCATGGATGATGACCATGAGTTCTCTGCTGCCCCTGTCATTGCTTGGCTTATGTACACTAGGGATTCCTTGCGCCAATTGCATTACAATGTGAGGACTAACCCCAGTTTCAACATCATCGAGAAATGCAGCAGGCATAGGCTGGAGGTGCTGGCATTGGCTCGCAATTCCATCATTGGTGTGGAGCCAGGTTATTTGAAGTTTCCTTGCTTGAGGTCGCTTTCGTTGAGTTTTGTTAGCATCTCGGCGTTGGATTTGAGCCTTCTGTTGTCGTCTTGTCCAAAGCTTGAAACCTTGGCTATGGTTAGCCCAGAGATTGCAATATCAGATTCTCAGGCTTCTGTGGAGCTTATCAGTGTTTCTTTGAAGGATTTCCACCTTGAATTGTTTAGTTCGGATAAGTTTATATTGGATGTGGATTTGCTCGAGAAACTTCATTTGAAAGATTGTACCTTTGAGATTTTTGAGCTGGTTGGAAAGGGAACACTGAAAGCGTTGAAAATTGATGACGTGAGTGTTATCCATCTTGATATTGGGGATGGTACGGAGAACCTTGAGATTGTAGATGTCTGCAACTTCACAATCATGTGGCCAAAATTTTATCACGTGATCTCAAAAGCATCAAAGTTATATAAGCTTCGGCTGTGGGGTGTTGTTTTTGATGATGAGGATGAGGTTGTTGATATAGAGACAATTTCTGTTTGCTTTCCTCAATTGAGGCATTTGTCGTTAAGTTATGATTTAAGAGATGGAGTGCTTCATTATGGCTTGCAGGGTTTGTCTTGTTTGAAGAATGTGGTGGTGTTAGAACTTGGATGGACTGTAATCAGTGATCTTTTCTCAGTATGGGTTGCTGGACTTTTGGAAGGATGTCCCAATTTGAAAAAATTGGTCGTTTATGGTTATGTTTCAGAGGTCAAAACACATGAAGAGTGCCAAATTCTTGCCAGATTCTCTGAATTCATTCTTCAACTAGGAAGAAAATATGGGCATGTAAAATTTGAGTTTGAATATGAGTAG 1260 0.4167 MDHLPVEVIGNILSLLGSARDVVVASATCKKWKEAWRSHLHSLSFNFCDWPLYHDYTSPRLEMLITQTIFQTKALQFLTIFMDDDHEFSAAPVIAWLMYTRDSLRQLHYNVRTNPSFNIIEKCSRHRLEVLALARNSIIGVEPGYLKFPCLRSLSLSFVSISALDLSLLLSSCPKLETLAMVSPEIAISDSQASVELISVSLKDFHLELFSSDKFILDVDLLEKLHLKDCTFEIFELVGKGTLKALKIDDVSVIHLDIGDGTENLEIVDVCNFTIMWPKFYHVISKASKLYKLRLWGVVFDDEDEVVDIETISVCFPQLRHLSLSYDLRDGVLHYGLQGLSCLKNVVVLELGWTVISDLFSVWVAGLLEGCPNLKKLVVYGYVSEVKTHEECQILARFSEFILQLGRKYGHVKFEFEYE 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02180 419 SUPERFAMILY F-box domain 1 68 IPR036047 GO:0005515
Phco2g02180 419 SMART fbox_2 4 45 IPR001810 GO:0005515
Phco2g02180 419 Pfam F-box-like 1 36 IPR001810 GO:0005515
Phco2g02180 419 SUPERFAMILY RNI-like 113 382 - -
Phco2g02180 419 Gene3D Ribonuclease Inhibitor 35 400 IPR032675 -
Phco2g02180 419 PANTHER F-BOX PROTEIN-LIKE 3 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02180 Phco-Chr2 52511853 52513112 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02180 2 52511853 52513112 Phco2g02180 2 52511853 52513112 ECH