Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02106 ATGAAGATCCTCCACAAAGATTTCGCCCTCAACCAAACTGGAACTGCCAAGCTCATGGCTGAAGAACCCGACGACGTCTGGGTCCTCTACAACCTCATCCTCCCTGGCGACGTCGTTTCCGCCGACACCACGCGCAAGGTCCACCTCGATTCCTCCACCAAGAAAAACACACCATCACGTATCAAGCTCACCCTCAACCTCAAAGTCACGTGCCGCGACTTCCACAAAGACTCCTCCACCCTCCGCCTCCACGGCCGCAACCTCCACTCCAACCAACAAGTCGCCGCCGGCTCCTTCCACACCCTCTCCCTCGAACCCCACAAACCCTTCGTCCTCCGCAAAAATCTCTGGGAAAACGAAGCCCTCCAAACCCTAAAGGACACCGCCCAAAAAGAACATTCAAAATCAAATTCCACTTCCATTTCCGACCTTGCCGTCGTTCTCTTCCACCCACACCACGCAGAGATCCACCTCATTGCAGAAGGAGCCACCACGCACTGCACCAAGGTCGAATCCTCTCCCAACTCCAGAAAAAACGGAAAAGTTTCTTCGTCCGTATTTTTCCGCCGAGTGTTGGCGGCGTTGGTGAAGCTCGTGGATTTCAAGGTTTTGAGGAGCGTGGTGGTGACGAGCGAGGAGTTTCGTAGGTTTGCGGTGTCGGAAGCGAGGAAGTTGAGGATACGATGGATCGAGGATAACAAGACGCGCGTGGTGGTCGTGGAGGATGGTGATTGTTTGGAGAAAGTTCTGAGTGACCCGACGGTGACGGAGTTGGTGAAGGACAGCAAGATTGGGGCTTTTAGGGATTTGTGGGAGATGGTGTGCAACGATTCGGGCCGAGCGTGTTATGGAGCCGAGGAGGTGGAGCGTGCGAAAGAAATGAGAGCGATTGAAACACTTCTGATTACCGATGATCTTTTTAGGAACGAGGAAGTTGGTACGAGGCAGAGATACGCGAGTTTGGTGAAATCGGTGAAAGACGGTGGAGGAAAGGCTTTGGTGTTTTCGCCGATGCATGTGTCGGCGCAGCAACTGGCGCAGCTCACCGGGGTTGCGGCCATTCTCCGGTTTCCCTTGCCTGATCTCGAACTCCAAGATGGAAATGGTGTTAAATAA 1116 0.5376 MKILHKDFALNQTGTAKLMAEEPDDVWVLYNLILPGDVVSADTTRKVHLDSSTKKNTPSRIKLTLNLKVTCRDFHKDSSTLRLHGRNLHSNQQVAAGSFHTLSLEPHKPFVLRKNLWENEALQTLKDTAQKEHSKSNSTSISDLAVVLFHPHHAEIHLIAEGATTHCTKVESSPNSRKNGKVSSSVFFRRVLAALVKLVDFKVLRSVVVTSEEFRRFAVSEARKLRIRWIEDNKTRVVVVEDGDCLEKVLSDPTVTELVKDSKIGAFRDLWEMVCNDSGRACYGAEEVERAKEMRAIETLLITDDLFRNEEVGTRQRYASLVKSVKDGGGKALVFSPMHVSAQQLAQLTGVAAILRFPLPDLELQDGNGVK 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02106 371 SMART eRF1_1_2 1 130 IPR005140 -
Phco2g02106 371 Pfam eRF1 domain 1 1 127 IPR005140 -
Phco2g02106 371 Gene3D Pelota, domain A 1 131 IPR038069 -
Phco2g02106 371 FunFam Protein pelota homolog 1 131 - -
Phco2g02106 371 Pfam eRF1 domain 3 268 359 IPR005142 -
Phco2g02106 371 Gene3D - 260 370 IPR029064 -
Phco2g02106 371 PANTHER PELOTA 1 363 IPR004405 GO:0070481|GO:0070966|GO:0071025
Phco2g02106 371 Gene3D eRF1 domain 2 143 259 IPR042226 -
Phco2g02106 371 SUPERFAMILY Dom34/Pelota N-terminal domain-like 1 128 IPR038069 -
Phco2g02106 371 SUPERFAMILY Translational machinery components 142 263 - -
Phco2g02106 371 FunFam Protein pelota homolog 260 370 - -
Phco2g02106 371 SUPERFAMILY L30e-like 266 362 IPR029064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02106 Phco-Chr2 51835721 51836836 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02106 2 51835721 51836836 Phco2g02106 2 51835721 51836836 ECH