Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02079 ATGTCTGGCCCTGTGGCCATTGCAGATTATTCAAACGGAGCACTTTCTTGTGCAGACAGAACAAAATATGTTGATGTGCTTCCTGAATTAGACCAACCTTCTACATTGACAAACGGTGAAAGTGATGGCTTTAGTGTTGGGCAACTCTTACTTACTAATGGAGAGTCATATTCTGGATCCCTTTATGGCAATGTTTCTGAGGGTCATGGGACGTACGTTTGGTTTGATGGTTGTGTATATGAGGGTGAATGGAGGAGAGGTACGAGAAATGGGTATGGGAAGATAAGATGGCCTTCTGGAGCAGAGTATGAAGGTGATTTCTCTGGTGGATATATCCATGGAACGGGGACATATATTCGTTCCGATAAATTGACCTATAAAGGTAGATGGCGTTTGAATCTTAAACATGGTTTGGGGTATGAAGTTTATCCTAATGGAGATACCTTTGAAGGTTCTTGGATGCGAGGAACACCAGAGGGCCCTGGCAAGTATACCTGGAGCAATGGAAATGTTTACGTAGGGAATATGAAAGGTGGGATAATGTCAGGAAAAGGAACACTCACCTGGATAAATGGGGACTCATATGAAGGCAACTGGTTAAATGGCATGATGCATGGATTTGGAGTTTACACTTGCAGTGATGGAGGATGTTATGTTGGGACTTGGACATTTGGTCTAAAAGATGGCAAAGGAACCTTTTATCCAAGAGGTAGCCGGCTTCCATCAGTGCAAGAAATTTATCTCAGTGCCTTGAGAAAAAGAGGGCTATTGCCAGATTTGAAAAAACAAAAGCGAGTGAGAGATGTCGGGGTACCAGAAAATCAGCTGTCAAGTTATGGTTCATCTGATAAGCTAGCAAAAGGAAACCTGTTAAATCTGGAACAGTCTAATAGAAGAAATGTGTCTCTTGAAAGGCGTTGGAGTCTTGAGGTGTCGATTGAGAAAGTGATTGGATATGATTCAGCATTAGGATTAGCAGATTCTGTGCCAGAAAGTAGCGACAAAGAGGTTGATACAACGATCCCAATTTTGGAACGAGAGTACATGCAAGGTGTATTGATAAGTGAGGTTGTGTTAAATAACATGTTTTCATCAATGTCTAGAAGGGCAAGGCGACTTCAAAAAAAGCTTGCCAAAGAGATTAAAAGACCTGGTGAAATAATCATTAAAGGTCACAGGAGTTATGATCTAATGCTCAGTTTGCAGCTTGGAATAAGGTATACCGTGGGCAAGATAACACCTATACCTACGCGAGAAGTAAGAATATCAGATTTTGGTAGCAAAGCAAGCTTTTGGATGAATTTTCCTAAAGAAGGTTCTCAATTAACACCTACCCATGCATCCGACGATTTTAAATGGAAAGATTACTGCCCCATGGTGTTCAGAAATTTGAGAGAGATGTTCAAGATTGATGCTGCCGACTACATGATGTCCATTTGTGGAAACGATACTCTGAGGGAATTATCTTCTCCAGGGAAAAGTGGTAGTGTCTTTTTCCTGTCTCAGGATGACCGTTTCATGATCAAGACACTGCGAATGTCTGAAGTCAAGGTTCTTCTAAGAATGCTGCCAGACTATCATCATCATGTGAAGTCATACGAAAATACACTTATCACAAAATTCTTTGGCTTGCACAGGATTAAGCCTTCAAGTGGCCAGAAGTTTCGCTTCGTTGTAATGGGAAATATGTTCTGCACGGAACTGAGGATCCATCGGAGATTTGATTTAAAAGGTTCGTCCTTGGGACGATCATCAGACAAGATAGAAATTGACGAAAATACAACTCTAAAAGATTTGGATCTTAACTACTGCTTCTATTTGGAACCGTCTTGGCGGGAGTCTTTATTAAAGCAGATTGAAATAGACAGCAAATTTTTAGAAGCACAACACATTATGGATTACAGCCTTCTTCTAGGTGTTCACTATCGAGCTCCACAGCATCTGCGTCCTCTCATATCATACAATCAAAGTAGAAGTGTGGATGGATTAGCAATGCTTGCAGAGGAAGATCCTCTGGAGGATGAAGCATCCTATCCACAAGGCCTTGTTCTAGTTCCTAGAGGAGCAGATGATAACAGTGTTGTTGTAGGCTCACATGTGAGGGGTAGTCGGTTAAGGGCTTCATCTGCTGGTGATGAGGAGGTGGATCTACTTCTACCTGGTACAGCAAGACTCCAAATCCAGCTTGGTGTGAACATGCCTTCAAGGGCAGAGCAGATTTCGGGAAAACAAGAACAACAAAAGTTGCACGAGGTGTACGATGTGGTGCTGTACCTGGGTATCATTGATATATTGCAGGACTATAACATGACCAAGAAGATTGAACATGCTTATAAATCTCTTCATTTTGATTCATTGTCTATATCAGCGGTGGACCCTACATTCTACTCTCGTCGTTTCCTGGAGTTTATTCAGAAAGTGTTTCCACCAAATGCAATGGCAGGTTAA 2448 0.4171 MSGPVAIADYSNGALSCADRTKYVDVLPELDQPSTLTNGESDGFSVGQLLLTNGESYSGSLYGNVSEGHGTYVWFDGCVYEGEWRRGTRNGYGKIRWPSGAEYEGDFSGGYIHGTGTYIRSDKLTYKGRWRLNLKHGLGYEVYPNGDTFEGSWMRGTPEGPGKYTWSNGNVYVGNMKGGIMSGKGTLTWINGDSYEGNWLNGMMHGFGVYTCSDGGCYVGTWTFGLKDGKGTFYPRGSRLPSVQEIYLSALRKRGLLPDLKKQKRVRDVGVPENQLSSYGSSDKLAKGNLLNLEQSNRRNVSLERRWSLEVSIEKVIGYDSALGLADSVPESSDKEVDTTIPILEREYMQGVLISEVVLNNMFSSMSRRARRLQKKLAKEIKRPGEIIIKGHRSYDLMLSLQLGIRYTVGKITPIPTREVRISDFGSKASFWMNFPKEGSQLTPTHASDDFKWKDYCPMVFRNLREMFKIDAADYMMSICGNDTLRELSSPGKSGSVFFLSQDDRFMIKTLRMSEVKVLLRMLPDYHHHVKSYENTLITKFFGLHRIKPSSGQKFRFVVMGNMFCTELRIHRRFDLKGSSLGRSSDKIEIDENTTLKDLDLNYCFYLEPSWRESLLKQIEIDSKFLEAQHIMDYSLLLGVHYRAPQHLRPLISYNQSRSVDGLAMLAEEDPLEDEASYPQGLVLVPRGADDNSVVVGSHVRGSRLRASSAGDEEVDLLLPGTARLQIQLGVNMPSRAEQISGKQEQQKLHEVYDVVLYLGIIDILQDYNMTKKIEHAYKSLHFDSLSISAVDPTFYSRRFLEFIQKVFPPNAMAG 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02079 815 SUPERFAMILY SAICAR synthase-like 390 808 - -
Phco2g02079 815 Pfam MORN repeat 126 148 IPR003409 -
Phco2g02079 815 Pfam MORN repeat 218 239 IPR003409 -
Phco2g02079 815 Pfam MORN repeat 149 171 IPR003409 -
Phco2g02079 815 Pfam MORN repeat 172 193 IPR003409 -
Phco2g02079 815 Pfam MORN repeat 195 216 IPR003409 -
Phco2g02079 815 Pfam MORN repeat 57 79 IPR003409 -
Phco2g02079 815 Pfam MORN repeat 80 100 IPR003409 -
Phco2g02079 815 Pfam MORN repeat 103 122 IPR003409 -
Phco2g02079 815 Gene3D - 563 808 - -
Phco2g02079 815 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 166 237 - -
Phco2g02079 815 CDD PIPKc_AtPIP5K_like 394 807 - -
Phco2g02079 815 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 67 808 IPR023610 -
Phco2g02079 815 PIRSF PIP5K_plant 13 812 IPR017163 GO:0005524|GO:0016308
Phco2g02079 815 FunFam Phosphatidylinositol 4-phosphate 5-kinase 380 562 - -
Phco2g02079 815 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 52 174 - -
Phco2g02079 815 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 391 808 IPR002498 GO:0016307|GO:0046488
Phco2g02079 815 SMART PIPK_2 421 809 IPR002498 GO:0016307|GO:0046488
Phco2g02079 815 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 480 806 IPR002498 GO:0016307|GO:0046488
Phco2g02079 815 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 380 562 IPR027484 -
Phco2g02079 815 SMART morn 124 145 IPR003409 -
Phco2g02079 815 SMART morn 170 191 IPR003409 -
Phco2g02079 815 SMART morn 193 214 IPR003409 -
Phco2g02079 815 SMART morn 78 99 IPR003409 -
Phco2g02079 815 SMART morn 216 237 IPR003409 -
Phco2g02079 815 SMART morn 147 168 IPR003409 -
Phco2g02079 815 SMART morn 55 76 IPR003409 -
Phco2g02079 815 SMART morn 101 122 IPR003409 -
Phco2g02079 815 Gene3D - 201 243 - -
Phco2g02079 815 Gene3D - 110 154 - -
Phco2g02079 815 Gene3D - 155 200 - -
Phco2g02079 815 Gene3D - 59 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02079 Phco-Chr2 51533379 51539023 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02079 2 51533379 51539023 Phco2g02079 2 51533379 51539023 ECH
Phco2g02079 2 51533379 51539023 Phco6g00709 6 7043019 7056571 PCT