Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02063 ATGGGGATACTGCACGACGACGTAGTGATTATCAGGGAGGCTGAGAAAGAAGGTGAAACCACCGTCATAACCGTCAACTGCCCTGACAAGACCGGTCTGGGTTGTGATTTGTGTCGTATAATTCTCTTCTTCGGTCTTAGCATTGTACGAGGAGATGTGTCCACCGATGGAAAATGGTGCTACATAGTTTTCTGGGTGGCGGGAAAGCAAAGGACCAGGTGGAGTTTGTTGAAGAAGAGGCTAATTGAGGCGTGTCCTTCTTGTTCCTCAGCCTCTGGGATTTCATATTACCGTTCAGAATTGCAGTCTCCTAAACCTTCTGATGTGTTCCTCTTGAAATTTTGTTGTCATGATCGAAAAGGCCTTTTACATGATATTACAGAGGTTCTTAGTGAGCTAGAGCTCATCATACACAAAGTGAAGATTTCTACTACACCTGATGGCAAAGTGGTGGATCTGTTTTTCATCACGGATACCAGGGAACTTCTACATACAAAGAAGAGAAGGGACGACACAATTGAACAGTTGTCAGTTATTTTGGGGGATCCCTCAATTACCGTTGACATTGAATTGGTTGGCCCCGAAATTACTGCTTGTTCTCAATCATCTTCGTTCCTTCCAAGTGCAATCACAGAAGATATCTATGATTTGGAATTACCTGGTTCATTACAAAGCGGGACTTCCACATCTGATTCTGTTTCTATAGCAATAGACAATTCGTTGAGTCCTGCTCATACGCTTGTCCAAATTATATGTCAAGATCACAAAGGTCTTCTTTATGACATCATGAGAACTCTGAAGGACTACAATATTCAGATTTCTTACGGGAGATTCTCAACAAAACCCAGAGGAAAATGTGAGCTTGACTTGTTCATAGTGCAAGCAGACGGGAAAAAAATAGTTGACCCCAGCAAGCAGAAGTCTTTGTCATCACGCCTTAGGATTGAACTACTTCGTCCCTTCAGAGTAACTGTTGTAAGCAGGGGCCCTGATACGGAGCTGTTGGTTGCAAACCCTGCGGAGTTATCTGGCAAAGGACGACCCCTTGTTTTTTATGATATTACTCTTGCTCTCAAAATGCTTGGCCCCTCCATCTTTTCGGCTGAAGTTGGAAGACACGTGATTGGAGATCGGGAGTGGGAAGTTTATAGAATCTTGCTTGATGAGGGGGAGGGTTTATCTGTTCCGAGAAACAAGATTGAGAAAGGAGTTTGGAAGATGTTGATGGGTTGGGTTAGTTCAACAAGGACTTCACCAGATGTCACCTACATGAATATCACAGGGAGCATCATGTCACATCAACATATGGCAAACCCTGAATCTGTCCATTGA 1332 0.4354 MGILHDDVVIIREAEKEGETTVITVNCPDKTGLGCDLCRIILFFGLSIVRGDVSTDGKWCYIVFWVAGKQRTRWSLLKKRLIEACPSCSSASGISYYRSELQSPKPSDVFLLKFCCHDRKGLLHDITEVLSELELIIHKVKISTTPDGKVVDLFFITDTRELLHTKKRRDDTIEQLSVILGDPSITVDIELVGPEITACSQSSSFLPSAITEDIYDLELPGSLQSGTSTSDSVSIAIDNSLSPAHTLVQIICQDHKGLLYDIMRTLKDYNIQISYGRFSTKPRGKCELDLFIVQADGKKIVDPSKQKSLSSRLRIELLRPFRVTVVSRGPDTELLVANPAELSGKGRPLVFYDITLALKMLGPSIFSAEVGRHVIGDREWEVYRILLDEGEGLSVPRNKIEKGVWKMLMGWVSSTRTSPDVTYMNITGSIMSHQHMANPESVH 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02063 443 SUPERFAMILY ACT-like 244 298 IPR045865 -
Phco2g02063 443 Pfam ACT domain 112 168 IPR002912 -
Phco2g02063 443 SUPERFAMILY ACT-like 18 81 IPR045865 -
Phco2g02063 443 ProSiteProfiles ACT domain profile. 247 330 IPR002912 -
Phco2g02063 443 ProSiteProfiles ACT domain profile. 111 194 IPR002912 -
Phco2g02063 443 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 9 400 IPR040217 -
Phco2g02063 443 SUPERFAMILY ACT-like 107 185 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02063 Phco-Chr2 51383157 51386486 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02063 2 51383157 51386486 Phco2g02063 2 51383157 51386486 ECH
Phco2g02063 2 51383157 51386486 Phco6g00696 6 6940736 6943661 PCT