Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02060 ATGGTTTGGAGCCACTCTCCGAACTCGCTTAGCCTCTCCTCTCTCGTAATGGCGTCTCCGTTTGAATTCGCGGACCACGACGAAAACCTAATCGCAACGCGACGACAACTCATCCGAGGACCCGCACACTATGAATTCACCGACGATGAAGACACCGACGACGAAGGCGACGAAGAGTACGTTCCCGGTGTGGCCTCCCCCAGGGCTTCGCACGACACTCCTCGTATCGTTTCATCCAATAACTTAATCGTTATCCCCGACGAATCGCAGGATTTGGTTGAAGAGGAAGGAAATAAACGCCGCAGGTACGAAGGAGGCGAGACTTCTTGTTCCGCGATTGGGAGCAGCGACGGTAGCCAAGGAAACAACCACACCGACATTGACGGTCTCTTTTGCCCTATTTGCATGGATGTTTGGACCAATAACGGCGAACATCATATCTGTTGTCTTCCATGTGGACACATATATGGCATGTCTTGCATTAAAAGATGGCTTCAACAGCGCAAAAATTCCAGCAAGTGTCCACAATGTAATAGGAAATGTACGTTGAAGGACGTGAGGAAACTCTTTGCTTCCCGAGTAGTTGCCGTCGAGGAAGAGTCTCAGAAGAGAATTCAGTCACTTGAGGCCAAATGTGCTGCCCTTGAAAGTAAGGCCAGTGATTGGCGCAAGAAAGAAGATGGATGGAAGTATCAAGAAGCCGCCCTGCATGTTCAAGTTCAGAGTCTTACAGAGAGAAACACTTATTTGGAGCAGCTGCTGCTAGATATGCAGAGCAGGCAATCTGCATCGATAAGTGGCAATAGAAACTCTCAGTGGATATGTGAATCTGAGCACAACATCGGCCCAAAGTACTGGGGAAAGGGATCCATTTGTAATTTTGAATTGCAGAAAGAGTTTCATCTGGATGGTGGGCGCATTTTTGATATGGACATCTCTAATCAAATTTTGTTAATCGCACAAAAGCCAAAGGAAGTAGGTGGAATGCATTTGCTAACTAAAATGAGCTTGTTGTCTCCATTTGAGACGCAAGATATCTTGCTGCCTTCTGATACATTTGGTGTTAAAGACCTGCATATTTCTCCTTCTAATAGTAGTCTGGTTCTCTTTTCTTCATTAGGAAAGAAACTATCAGTGCTCAGCTTGGACAGTGGCAATCTTGTTATCAATTATGATCTACAGGATCCTGCATGGTCTTGTTCGTGGGATCTCAACAATTCTCATAACATATATGCTGGGCTACAGAATGGTTCTGTCTTAGTGTTTGACATGCGTCAAACTGTAGGCCCCGTGAAATCTTTAGTTGGTTTGACTAACAACCCTGTGCATACTGTCAATTCTCTTGCACAAACTTCAAGTCTTTCTTCGGGTGTTAAAACCATCCTATCGGCATCTGCCTTTGGCCTTTGTCAGTGGAACATTGATTCTGAAGAACGGCCGCTTGTGGTTCCTGAAACTGACAATCAAGGAGTCTGCATATCCCTTGCCTATTGCCCTAGCAGTGATGACATTGTTGCTTCTTACAGACCGATATTCAGTATGTCCATGGATGTGCCTCTATCTCAACCATTGGCTACTCCTCTTAGTGCTGGACAAGGAGTACAGGGCACTCATGTCTTGTTCAATAGAATGGGTGGTCATCATTTCCAAAAGGTGGGTTCCTCATATGCCAATGTGAGTAAAATTCGACTACCAAAATGTGTAATTATGGACATAGAGAATCAGAGCAGATTGTTTGCATCTTGGGATGAAGTTACATGTGATTTGCTCTTGCATGAGTTGCCATCTTTTAGAGTTCTTCAGCAATTCAAAATGCCAGCTCAGGCTCGTGATCTTAGGTACTCAGCTAGCCACGGCATACTTGGTTGTTTAAGTGAGAACACGTTGCAGCTTTTCTATTCCAAACACTGTCGGTAA 1917 0.4502 MVWSHSPNSLSLSSLVMASPFEFADHDENLIATRRQLIRGPAHYEFTDDEDTDDEGDEEYVPGVASPRASHDTPRIVSSNNLIVIPDESQDLVEEEGNKRRRYEGGETSCSAIGSSDGSQGNNHTDIDGLFCPICMDVWTNNGEHHICCLPCGHIYGMSCIKRWLQQRKNSSKCPQCNRKCTLKDVRKLFASRVVAVEEESQKRIQSLEAKCAALESKASDWRKKEDGWKYQEAALHVQVQSLTERNTYLEQLLLDMQSRQSASISGNRNSQWICESEHNIGPKYWGKGSICNFELQKEFHLDGGRIFDMDISNQILLIAQKPKEVGGMHLLTKMSLLSPFETQDILLPSDTFGVKDLHISPSNSSLVLFSSLGKKLSVLSLDSGNLVINYDLQDPAWSCSWDLNNSHNIYAGLQNGSVLVFDMRQTVGPVKSLVGLTNNPVHTVNSLAQTSSLSSGVKTILSASAFGLCQWNIDSEERPLVVPETDNQGVCISLAYCPSSDDIVASYRPIFSMSMDVPLSQPLATPLSAGQGVQGTHVLFNRMGGHHFQKVGSSYANVSKIRLPKCVIMDIENQSRLFASWDEVTCDLLLHELPSFRVLQQFKMPAQARDLRYSASHGILGCLSENTLQLFYSKHCR 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02060 638 SUPERFAMILY RING/U-box 126 184 - -
Phco2g02060 638 SUPERFAMILY WD40 repeat-like 294 508 IPR036322 GO:0005515
Phco2g02060 638 MobiDBLite consensus disorder prediction 44 72 - -
Phco2g02060 638 Coils Coil 198 225 - -
Phco2g02060 638 MobiDBLite consensus disorder prediction 87 121 - -
Phco2g02060 638 CDD mRING-C3HGC3_RFWD3 128 190 - -
Phco2g02060 638 SMART ring_2 132 177 IPR001841 -
Phco2g02060 638 Gene3D - 333 530 IPR015943 GO:0005515
Phco2g02060 638 PANTHER RFWD3 PROTEIN 48 633 IPR037381 GO:0004842|GO:0005634|GO:0016567|GO:0036297
Phco2g02060 638 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 127 250 IPR013083 -
Phco2g02060 638 ProSiteProfiles Zinc finger RING-type profile. 132 178 IPR001841 -
Phco2g02060 638 Pfam Ring finger domain 132 178 IPR001841 -
Phco2g02060 638 MobiDBLite consensus disorder prediction 92 106 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02060 2 51354658 51359878 Phco2g02060 2 51354658 51359878 ECH