Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02031 ATGAAATCAAAGAGTAAAATGGAGGCAGAGACATTGAGTCCCAACCACCCTCCTAGCTTTCTTCGTCAGTCACTTCCTGCTATTGTACCTATGCTTTTGATTTCTACGGGATATGTTGACCCTGGAAAGTGGGTAGCGACCGTTGAAGGTGGGGCGCGGTTTGGGTTTGATCTGATGGCTTTCATGCTTATTTTCAATTTTGCTGCTATATTCTGTCAGTACATATCTGCAAGGATTGGCGTAGTTACAGGAAAGAATCTAGCTCAGATTTGCAGTGATGAGTATGATACATGGACATGTATGCTCCTTGGAGTTCAAACAGAACTTTCAGTGATAATGCTAGACCTTAACATGATCTTGGGCATGGCACAAGGGTTAAATCTTATTTTTGGGTGGGACTTGTTCAGTTGTGTCTTTTTAGCTGCCACCGGTGTTGTTTTTCACATACTTCTTGCAGTCTTACTTGACATTGAGACGGCAAAATTCCTAGGCCAGATTGTTGCAGGCTTTGTATTGGTTTCTTTTATACTCGGAATGCTTATCAATCAACCGGAAATTCCATTTTCTATGAATGGAATACTAATAAGATTGAGTGGGGAGAGTGCATTTGTGTTAATGAGTCTTCTAGGAGCAAATCTTGTACCTCACAACTTTTACCTTCATTCCTCTATTGTACAGTGGCATCAAGGACCGGCAAGCATCTCACAGAAAGCTTTGTGTCATAACCATTTTTTGGCCATATTATGTGTTTTCAGTGGTCTTTATTTGGTAAATAATATGCTCATGACCTCCTCGGCAAATGAGTTCTACAGTACCGGGCATGTTCTGCTAACTTTCCAGGATGCATTGTCACCAATGGAACAGGTCTTTCGTAACCCAATAGCTCTACTTGGGTTTTTACTCCTTTTGTTTCTTGCAAATCAAATCACAGCATTAACTTGGAGTTTAGGTGGAGAAGTAGTAGTGCAAGGTTTCTTAAAATTGGATATTCCGGGTTGGCTTCATTATGCTACAATTAGAGTGATTACTGTTTCGTCTGCCCTTTATTTTGTCTGGAGTTCAGGAGCTGAAGGGATGTATCAGCTACTATTATTCACTCAAGTTTTGGTAGCTCTACAACTTCCATCTCTAGTGATCCCCCTTTTTCGTGTTGCTACATCTAGATCAATAATGGGTGTACACAAGATTTCCCAGTTTCTGGAACTTTTGGCATTGATCATATTCATTGGGATGCTTGGATTGAATATTGTATTTGTGGTAGAAATGATGTTTGGAAATAGTGATTGGGCTAGTGATTTGAGATGGAATGTGGGGAGTGGTGTATCTATCTCATATTTAGTTCTTCTAACAACTTCTTTTTCATCGTTATGTTTTATGCTTTGGTTAGCTGCCACACCTTTGAGATCTCTCAGTGTTCGATTAGATTCTAAGATATGGAATTGGGATATGCCAACGACTCTGCCAAATCCACCAATTATTGGCGAGAAATCTTATTTAACTGAAACAAGGTGTCGAGAAGATGCATCTATGCATGTGGAGGAACCCACACCAGCTGTAGCAAAGACCTTGGAGTACCCAGATGTATCATATCCAAGTTTTCATCCTGCGCTACCTAAATCTGTAATGGAACCTGAACTTCATGTGAATGTTGCAAGGGCGAATCATTCTGCTATGTTGGCTTCCACATCAGAGTCAGAAGTTGTAACAACTGTGATTAATGAGATTTCCAATTCTCAATTGGAAGACACCAAAACTAAAACAATGGAAACAAATAACCCGATTGAGAAAACTATGGAAGTTGAAGGAGATTCAAATGTTGAAAGGGATGATGATGATGATGGCGATTCATGGGAAGCTGAAGAACCTTCTGGATTTGTGTTAGCAAATGTACCATCTTCAACATCAGATGGCCCTGCATCATTCAGGAGTCTTAATGGCAAAACTGATGAAGGAGGGAATAGCTTTGGAAGTCTTTCGAGAATAGAAGGCTTAGGGCGTGCAGCAAGGCGTCAGCTAGCTGCTGTTCTTGATGAATTCTGGGGACAACTATTTGATTTCTATGGCCATATAACTCAGGAAGCAAAGGCTAATAAAATTGACCTTTTGCTGGGAGTGGGTGTCGATTTTAGACCTACCAGTTCTTTGCAAAAAGTGGATGTATCTAGAAAGGACTATTCTGAATACTCAGGATCTGTAAGAGGTAGAGCTTCTAATACTTTAGCGAATTCTGATCTATATGATTATTCCAAGCAGCCTATGATGCAAAGTAATTCAGAGTCTTATGGCCTCCAAAGGAGTACTTCCTCAATGCGGACAGATTCCATCCAATTATTGGATGCATATGTGCAGAACTCGACCCACAATCTCCTTGATTCGGGTGAGAGGCGCTATTTCAGTGTGCGTAATCTACATTCATCAGAGGCTCGGGATTATCAACCAGCTACCATACATGGTTATCAGACTGCATCCTATCTTAGTCGACTTGGTAAAGACACAGATTCTGCTAACTTAAATGGTCCAGTGGACTTGTCATCACTGAAATCCCCTTCCATAGTTAATGCAAAGTACAGGGATTCTCTTGCATTTGCTTTGGGGAAAAGATTGTGTAGTGGTCCAAGTGTAGGCCAACCCCCTGGGTTCCCAAAAGTAGCTATCTCTAGAGATTGCCAATTACAATCTGAGAGGTCTTATTACGATTTTTGCTCTTCTGGATCTGCAGATAATTCAGTGAACTCAGTTAATACTAAAAAGTACCACAGTTTGCCAGACATTTCAGGATACTCCATCCCCCACAGGTCTGCTTATGTGTCTGATAAAAATGCTCCATCGGATGGTTCTGTTGGATATGGATCTTGTGCCAGTAGGACGTGTTATCAAAGAACACCATATTCAAATTCTGGAACAAGAACAGGAGGTCATTTGACCTTCAATGAACTCTCTTCATCTAAAGCTTACAACGAGGTACTCTCTTCACAGTGGAGCTCTGGTTTTGATACTGGATCCTTCCGATCTAGACTGCCTTGTGAGCAGTTTGGGCCTGAGAAAAATCGTAATATTGCAATGGAAGGTGTCGGAAGTAGGCCTAAGGCAATTGTTCAAGAAACTACATTTGTGGATATGGAGAGGAAACTTCTTCTGTCAGTTAGACTTTGCATTGTGAAGCTCTTAAAATTGGAGGGGTCTGATGGGTTGTTTAGACAGAACGGTGGAGCTGACGAGGATCTGATAGATTGTGTCGCTGCAAGGGAGAAGGTTGTTTGTGAATTTGAAACTAGGGAGACGAGTCAAGTGAATCATGAAAGTGAAGCTCAGTATTGTCTTTCTGATAGGAAACTTAGTTTTTCTTCATCTCCAGTACCTAATTGCGGGGAGGGATGTATATGGAGAACTGATTTAATAATAAGCTTTGGGGTGTGGTGTATCCACAATATTCTTAACCTTACACTTGTGGAAAGCCGGCCGGAGCTTTGGGGGAAATACACGTATGTTCTCAATCGCCTCCAGGGAATCATTGATCCGGCTTTCTTTAAGCCTCGTAGTCCCTTGGTCCCATGCTTTTGCCTTCAAGTTCTACCGGCGCATCAGCGAAAGTTAAACCCCCATCTTTCGAATGAGATGATACTCCCAACTGCTAAACCAGGCCGGGGCAAATGCACAACTGCATCAGGGTTGCTTGAACTTATCAAGGATGTGGAGCTTGCGATCTCTTGCAGGAAAGGACGTATAGGAACTGTTGCAGGTGATGTGGCTTTCCCTACGGGGAAGAAAAATTTGGCGTCTGTTCTCAAACGGTACAAGTGGAGGTTATCTAACAAGCCAGCGGGCACTAATGAAGGCACATGTTCACGCAAGACCCCACGTTAG 3864 0.4195 MKSKSKMEAETLSPNHPPSFLRQSLPAIVPMLLISTGYVDPGKWVATVEGGARFGFDLMAFMLIFNFAAIFCQYISARIGVVTGKNLAQICSDEYDTWTCMLLGVQTELSVIMLDLNMILGMAQGLNLIFGWDLFSCVFLAATGVVFHILLAVLLDIETAKFLGQIVAGFVLVSFILGMLINQPEIPFSMNGILIRLSGESAFVLMSLLGANLVPHNFYLHSSIVQWHQGPASISQKALCHNHFLAILCVFSGLYLVNNMLMTSSANEFYSTGHVLLTFQDALSPMEQVFRNPIALLGFLLLLFLANQITALTWSLGGEVVVQGFLKLDIPGWLHYATIRVITVSSALYFVWSSGAEGMYQLLLFTQVLVALQLPSLVIPLFRVATSRSIMGVHKISQFLELLALIIFIGMLGLNIVFVVEMMFGNSDWASDLRWNVGSGVSISYLVLLTTSFSSLCFMLWLAATPLRSLSVRLDSKIWNWDMPTTLPNPPIIGEKSYLTETRCREDASMHVEEPTPAVAKTLEYPDVSYPSFHPALPKSVMEPELHVNVARANHSAMLASTSESEVVTTVINEISNSQLEDTKTKTMETNNPIEKTMEVEGDSNVERDDDDDGDSWEAEEPSGFVLANVPSSTSDGPASFRSLNGKTDEGGNSFGSLSRIEGLGRAARRQLAAVLDEFWGQLFDFYGHITQEAKANKIDLLLGVGVDFRPTSSLQKVDVSRKDYSEYSGSVRGRASNTLANSDLYDYSKQPMMQSNSESYGLQRSTSSMRTDSIQLLDAYVQNSTHNLLDSGERRYFSVRNLHSSEARDYQPATIHGYQTASYLSRLGKDTDSANLNGPVDLSSLKSPSIVNAKYRDSLAFALGKRLCSGPSVGQPPGFPKVAISRDCQLQSERSYYDFCSSGSADNSVNSVNTKKYHSLPDISGYSIPHRSAYVSDKNAPSDGSVGYGSCASRTCYQRTPYSNSGTRTGGHLTFNELSSSKAYNEVLSSQWSSGFDTGSFRSRLPCEQFGPEKNRNIAMEGVGSRPKAIVQETTFVDMERKLLLSVRLCIVKLLKLEGSDGLFRQNGGADEDLIDCVAAREKVVCEFETRETSQVNHESEAQYCLSDRKLSFSSSPVPNCGEGCIWRTDLIISFGVWCIHNILNLTLVESRPELWGKYTYVLNRLQGIIDPAFFKPRSPLVPCFCLQVLPAHQRKLNPHLSNEMILPTAKPGRGKCTTASGLLELIKDVELAISCRKGRIGTVAGDVAFPTGKKNLASVLKRYKWRLSNKPAGTNEGTCSRKTPR 1287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02031 1287 NCBIfam Nramp family divalent metal transporter 30 223 - -
Phco2g02031 1287 MobiDBLite consensus disorder prediction 604 619 - -
Phco2g02031 1287 PRINTS Natural resistance-associated macrophage protein signature 307 326 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phco2g02031 1287 PRINTS Natural resistance-associated macrophage protein signature 205 228 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phco2g02031 1287 PRINTS Natural resistance-associated macrophage protein signature 367 386 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phco2g02031 1287 PRINTS Natural resistance-associated macrophage protein signature 103 129 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phco2g02031 1287 MobiDBLite consensus disorder prediction 598 649 - -
Phco2g02031 1287 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 10 464 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phco2g02031 1287 MobiDBLite consensus disorder prediction 627 649 - -
Phco2g02031 1287 PIRSF EIN2 7 1286 IPR017187 GO:0009873
Phco2g02031 1287 Pfam Natural resistance-associated macrophage protein 44 397 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02031 Phco-Chr2 51031402 51039348 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02031 2 51031402 51039348 Phco2g02031 2 51031402 51039348 ECH
Phco2g02031 2 51031402 51039348 Phco6g00693 6 6906301 6912257 PCT