Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02022 ATGATGAACACATCCAACGGCATGATGGCACCGTCGTCTTCGTCGGGAACGGTACAGTCGCCGGGGCTCAAAACTTATTTCAAAACTCTCGAGGGAAGATATAAGCTTCAATACGAGAAGACTCACCCTTCTGGTCTTCTTCATTACGCCCATGGAAAAACCGTTACTCAGGTAACCCTGGCACATCTCAAGGACAAGCCTGCACCTTCTACACCAACTGCGCCGTCTTCAAGTTTCAGTGCAAGCAGTGGGGTACGGTCTGCGGCCGCTCGATTATTGGGAGGAAGCAACGGAAGCCGGGCGCTTAGTTTTGTTGGAGGCAACGGTGGCAGCAAAAGTAATGGAGGGAACGGTAGGATTGGTTCCATTGGAGCCTCGAGTACAAGTAATTCAATGGCTAATCCAAATTTTGATGGGAAAGGGACATACCTGATATTCAACGTCGGTGATGCAATTTTCATTAGTGATTTGAATTCTCAGGACAAGGACCCCATAAAGTCTATTCACTTCAGTAACTCGAATCCAGTGTGCCATGCGTTTGATCAGGATTCTAAGGATGGGCATGATTTGCTCATTGGTTTGAACTCTGGCGATGTCTACTCAGTGTCACTGAGACAGCAATTACAGGATGTTGGTAAAAAGCTTGTTGGGGCACAGCATTACAACAAAGACGGTTCAGTCAATAACAGTCGTTGTACATGTATTGCTTGGGTGCCTGGAGGTGATGGTGCTTTCGTTGTTTCTCATTCTGATGGTAATTTGTACGTTTATGAAAAGAACAAAGATGGTGCTGGTGATTCTTCTTTTCCAGTTGTAAAAGATCAAACTCAGTTTTCTGTTACCCATGCACGTTACAGTAAGAGTAATCCGATAGCCAGATGGCATATATGTCAGGGTTCAATTAACAGTATTTCCTTCTCAATGGATGGAGCATACCTGGCAACTGGTGGACGAGATGGTTATTTGCGAGTGTTTGATTACTCAAAAGAACACCTTATCTGCGGTGGGAAAAGTTATTACGGTGCTTTGTTATGTTGTGCGTGGAGCATGGATGGAAAGTATATTTTGACGGGAGGGGAAGATGATTTAGTTCAAGTTTGGAGCATGGAAGATCGCAAGGTTGTGGCATGGGGTGAGGGACATAATTCATGGGTCAGTGGAGTTGCTTTCGATTCATATTGGTCGTCACCAAATTCAAATGACGATGGAGAGACCGTTATGTATCGTTTTGGTTCTGTTGGTCAGGATACACAATTGCTTCTATGGGACCTGGAAATGGACGAGATTGTAGTGCCGTTGAGGCGGCCAGCTGGTGGATCCCCAACTTACAGTACTGGAAGCCAGTCATCGCACTGGGACAATATTGTCCCATTGGGTACCTTGCAAGCTGCTCCCAGTATGCGGGATGTTCCAAAAATCTCTCCGTTGGTTGCTCACCGTGTGCATACTGAACCACTCTCTGGCTTGATATTTACCCAGGAATCTGTGCTTACTGCCTGTCGGGAAGGGCACATTAAAGTCTGGATGAGGCCAGGGGCTGCTTCCGAGACCCAATCAAGCAACTCTGAAAACTTGTTAACAATACCAACCAGTCTCAAGGAGAAGCCTTCACTCTCAACCAAGATCACCAATTCTGCCTACAAACAATGA 1650 0.4606 MMNTSNGMMAPSSSSGTVQSPGLKTYFKTLEGRYKLQYEKTHPSGLLHYAHGKTVTQVTLAHLKDKPAPSTPTAPSSSFSASSGVRSAAARLLGGSNGSRALSFVGGNGGSKSNGGNGRIGSIGASSTSNSMANPNFDGKGTYLIFNVGDAIFISDLNSQDKDPIKSIHFSNSNPVCHAFDQDSKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAQHYNKDGSVNNSRCTCIAWVPGGDGAFVVSHSDGNLYVYEKNKDGAGDSSFPVVKDQTQFSVTHARYSKSNPIARWHICQGSINSISFSMDGAYLATGGRDGYLRVFDYSKEHLICGGKSYYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSSPNSNDDGETVMYRFGSVGQDTQLLLWDLEMDEIVVPLRRPAGGSPTYSTGSQSSHWDNIVPLGTLQAAPSMRDVPKISPLVAHRVHTEPLSGLIFTQESVLTACREGHIKVWMRPGAASETQSSNSENLLTIPTSLKEKPSLSTKITNSAYKQ 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02022 549 SUPERFAMILY WD40 repeat-like 150 508 IPR036322 GO:0005515
Phco2g02022 549 MobiDBLite consensus disorder prediction 1 22 - -
Phco2g02022 549 Pfam WD domain, G-beta repeat 343 368 IPR001680 GO:0005515
Phco2g02022 549 Pfam WD domain, G-beta repeat 295 326 IPR001680 GO:0005515
Phco2g02022 549 ProSiteProfiles Trp-Asp (WD) repeats profile. 301 326 IPR001680 GO:0005515
Phco2g02022 549 MobiDBLite consensus disorder prediction 529 549 - -
Phco2g02022 549 Gene3D - 12 518 IPR015943 GO:0005515
Phco2g02022 549 SMART WD40_4 472 509 IPR001680 GO:0005515
Phco2g02022 549 SMART WD40_4 329 368 IPR001680 GO:0005515
Phco2g02022 549 SMART WD40_4 287 326 IPR001680 GO:0005515
Phco2g02022 549 SMART WD40_4 371 423 IPR001680 GO:0005515
Phco2g02022 549 SMART WD40_4 212 258 IPR001680 GO:0005515
Phco2g02022 549 MobiDBLite consensus disorder prediction 107 129 - -
Phco2g02022 549 ProSiteProfiles Trp-Asp (WD) repeats profile. 336 377 IPR001680 GO:0005515
Phco2g02022 549 PANTHER WD REPEAT PROTEIN 12 524 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02022 2 50914455 50920397 Phco2g02022 2 50914455 50920397 ECH