Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02008 ATGATTTATTCAGTAGCTCGTTGTATTGATATTTTTATTTCTTTCAACTATTTTGGGTGCTTCAGAGTTGAGTATCTTGTCCTTGATGAATCGGATAAGCTTTTTGAGCCTGAATTATTCAAGCAGATTGATTCTGTTCTCAAGGCATGCTCCAACCCATCAATCATACGCTCACTTTTCAGTGCTACTTTACCTGATTTTGTTGAGGATCGAGCTCGAGAACTTATGCATGATGCAGTTCGTGTAATTGTTGGCAGGAAGAATATGGCTTCTGAAACGATAAAGCAAAAATTGGTTTTTACTGGAAGTGAAGAAGGAAAACTTCTTGCAATTCGGCAAAGTTTTGCAGAGAGTCTAAATCCTCCAGTATTGGTCTTTCTCCAAAGCAAGGAACGAGCCAAGGAGCTGTACGACGAACTTGCATTTGACAACATTAGAGTTGATGTCATTCATTCTGATTTGTCTCAACAAGAGCGAGAAAATGTTGTTGATAACTTCAGAGCTGGAAAAGCATGGGTTTTGATTGCTACTGATGTGGTTGCCCGGGGCATGGATTTCAAAGGTGTGAACTGTGTGATCAATTATGATTTCCCTGATTCTGCCTCCGCTTATGTCCACAGAATTGGTCGTTCTGGCAGAGCAGGGAGGACTGGAGAAGCGATTACTTTTTACACAGAGGAAGACATTCCATTCCTGCGGAATGTTGCTAATCTTATGGCAGCATCGGGCTGCCTGGCCAGGCAACCCTGTGTTAAGATTTCTTCGTTACCCGTCCCCAAAAAGTTTAACACCATGAAAAGGGAGTGGGAGTGGAATGTGACCGAGAGAATCACGTTTTAG 840 0.4214 MIYSVARCIDIFISFNYFGCFRVEYLVLDESDKLFEPELFKQIDSVLKACSNPSIIRSLFSATLPDFVEDRARELMHDAVRVIVGRKNMASETIKQKLVFTGSEEGKLLAIRQSFAESLNPPVLVFLQSKERAKELYDELAFDNIRVDVIHSDLSQQERENVVDNFRAGKAWVLIATDVVARGMDFKGVNCVINYDFPDSASAYVHRIGRSGRAGRTGEAITFYTEEDIPFLRNVANLMAASGCLARQPCVKISSLPVPKKFNTMKREWEWNVTERITF 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02008 279 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1 82 IPR014001 -
Phco2g02008 279 Pfam Helicase conserved C-terminal domain 111 215 IPR001650 -
Phco2g02008 279 Gene3D - 2 93 IPR027417 -
Phco2g02008 279 CDD SF2_C_DEAD 94 224 - -
Phco2g02008 279 Gene3D - 94 268 IPR027417 -
Phco2g02008 279 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 17 233 IPR027417 -
Phco2g02008 279 PANTHER ATP-DEPENDENT RNA HELICASE RHLE-RELATED 6 248 - -
Phco2g02008 279 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 93 270 IPR001650 -
Phco2g02008 279 SMART helicmild6 134 215 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02008 Phco-Chr2 50785376 50787309 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02008 2 50785376 50787309 Phco2g02008 2 50785376 50787309 ECH