Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01958 ATGGCTTGTTTTCAACAAAAAATCTTTAACAGACTGAAACCATTCATAGGTGTAGTTTTCTTACAGTTTGGATATGCTGGTATGGATGTTCTATCCAAAGCTGCCCTCAACAAGGGAATGAGTAACTATGTGTTTGTCGTGTACCGTCATGTTTTTGCCTTTGTTGTCATGGCCCCTTTTGCGGTGTTCTTGGAGAAGAAAGTGAGGCCGAAGATGACGTTTTCAATCTTCATGAAGCTAGTGATTCTCAGCTTGCTAGAGCCAGTTATTGACCAAAATTTATATTTTTTGGGAATGAAGTACACCACAGCAACCTTTGCTGTTTCCATGTACAATGTCCTCCCTGCCATTACCTTTCTCATGGCTTGGATTTTTAGGCTTGAGAAGATAAAATTAAAAAGTATACGCAGTCAAGCAAAGGTGGTGGGAACTTTAGCTACTGTTGCAGGTGCCATGATCATGACACTGCTAAAGGGCCCAATACTTGATCTTTTTGGAACACACGGCAGCAATACAAACAACCTGCAAAATGGTGGGGTAAATCTTCAACATGCAATAAAGGGATCAGTGATGATCACAATTGGCTGCTTTAGTTGCGCTTGTTTCATGATTCTCCAAGCAATTACCATTGAAGCCTACCCTGCTGAGCTCTCCCTTACAGCATGGATATGCTTATTGGGAACGGTTGAAGGTGGCATAGTGGCACTAGTTATGGAAAGGAATAATTTTTCAGCTTGGTCTCTGCAATGGGATACAAAATTGCTGGCTGCTGTCTACAGTGGCATAGTTTGCTCAGGAATGGCTTATTACATCCAAGGCGTGGTGATGAAAGATAGAGGCCCGGTCTTTGTAACAACTTTCAACCCTCTTTGCATGGTCATTGTGGCTATCATGGGCTCCTTCTTTCTGGCAGAACAAATGTACCTTGGAAGGGCAGTTGGAGCTATTGTAATTATTTTAGGACTGTATCTTGTGGTGTGGGGTAAAAGCAAAGACTACGGGTCATCGAGTGCAATTACTGATGAAGAGGATATATTTTCAGCCAAGCAAACAGTAGAAAAGAGCAACGGCAAAGAAGAACATTCTAATTTCGAGGTTGTCACTCTCAGTAACTTAGGCACAGGAAACATAGCAAGAGATGAACAAGTATGA 1152 0.4193 MACFQQKIFNRLKPFIGVVFLQFGYAGMDVLSKAALNKGMSNYVFVVYRHVFAFVVMAPFAVFLEKKVRPKMTFSIFMKLVILSLLEPVIDQNLYFLGMKYTTATFAVSMYNVLPAITFLMAWIFRLEKIKLKSIRSQAKVVGTLATVAGAMIMTLLKGPILDLFGTHGSNTNNLQNGGVNLQHAIKGSVMITIGCFSCACFMILQAITIEAYPAELSLTAWICLLGTVEGGIVALVMERNNFSAWSLQWDTKLLAAVYSGIVCSGMAYYIQGVVMKDRGPVFVTTFNPLCMVIVAIMGSFFLAEQMYLGRAVGAIVIILGLYLVVWGKSKDYGSSSAITDEEDIFSAKQTVEKSNGKEEHSNFEVVTLSNLGTGNIARDEQV 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01958 383 PANTHER WAT1-RELATED PROTEIN 13 333 IPR030184 GO:0016020|GO:0022857
Phco2g01958 383 Coils Coil 383 383 - -
Phco2g01958 383 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 330 - -
Phco2g01958 383 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 156 - -
Phco2g01958 383 Pfam EamA-like transporter family 187 326 IPR000620 GO:0016020
Phco2g01958 383 Pfam EamA-like transporter family 19 154 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01958 Phco-Chr2 50264661 50267239 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01958 2 50264661 50267239 Phco2g01958 2 50264661 50267239 ECH
Phco2g01958 2 50264661 50267239 Phco6g00785 6 7763600 7767117 PCT